Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.8□□□□□ -0.04
MMP11P24347 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.8□□□□□ -0.04
MMP11P24347 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.8□□□□□ -0.04
MMP11P24347 AC106886.1-201ENST00000568660 600 ntBASIC14.8□□□□□ -0.04
MMP11P24347 AL359881.2-201ENST00000602973 570 ntBASIC14.8□□□□□ -0.04
MMP11P24347 WFDC1-204ENST00000613603 549 ntBASIC14.8□□□□□ -0.04
MMP11P24347 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.8□□□□□ -0.04
MMP11P24347 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MMP11P24347 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.8□□□□□ -0.04
MMP11P24347 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.8□□□□□ -0.04
MMP11P24347 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
MMP11P24347 TMBIM7P-203ENST00000641617 1718 ntBASIC14.8□□□□□ -0.04
MMP11P24347 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MMP11P24347 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
MMP11P24347 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.8□□□□□ -0.04
MMP11P24347 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
MMP11P24347 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
MMP11P24347 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MMP11P24347 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MMP11P24347 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
MMP11P24347 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
MMP11P24347 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
MMP11P24347 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MMP11P24347 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MMP11P24347 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
MMP11P24347 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
MMP11P24347 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.79□□□□□ -0.04
MMP11P24347 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
MMP11P24347 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
MMP11P24347 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
MMP11P24347 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.79□□□□□ -0.04
MMP11P24347 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
MMP11P24347 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MMP11P24347 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.79□□□□□ -0.04
MMP11P24347 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MMP11P24347 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MMP11P24347 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.79□□□□□ -0.04
MMP11P24347 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.79□□□□□ -0.04
MMP11P24347 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.79□□□□□ -0.04
MMP11P24347 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
MMP11P24347 TOMM22P5-201ENST00000416399 439 ntBASIC14.79□□□□□ -0.04
MMP11P24347 ARSEP1-201ENST00000420443 635 ntBASIC14.79□□□□□ -0.04
MMP11P24347 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.79□□□□□ -0.04
MMP11P24347 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.79□□□□□ -0.04
MMP11P24347 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.79□□□□□ -0.04
MMP11P24347 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MMP11P24347 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
MMP11P24347 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
MMP11P24347 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.79□□□□□ -0.04
MMP11P24347 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
MMP11P24347 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.79□□□□□ -0.04
MMP11P24347 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.79□□□□□ -0.04
MMP11P24347 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.79□□□□□ -0.04
MMP11P24347 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
MMP11P24347 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
MMP11P24347 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.79□□□□□ -0.04
MMP11P24347 AL162274.1-201ENST00000617191 1098 ntBASIC14.79□□□□□ -0.04
MMP11P24347 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.79□□□□□ -0.04
MMP11P24347 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.79□□□□□ -0.04
MMP11P24347 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
MMP11P24347 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
MMP11P24347 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
MMP11P24347 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
MMP11P24347 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MMP11P24347 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.79□□□□□ -0.04
MMP11P24347 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
MMP11P24347 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
MMP11P24347 AC006486.2-201ENST00000624246 2199 ntBASIC14.78□□□□□ -0.04
MMP11P24347 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.78□□□□□ -0.04
MMP11P24347 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
MMP11P24347 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
MMP11P24347 AC011477.6-201ENST00000604980 1927 ntBASIC14.78□□□□□ -0.04
MMP11P24347 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
MMP11P24347 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
MMP11P24347 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.78□□□□□ -0.04
MMP11P24347 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
MMP11P24347 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
MMP11P24347 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
MMP11P24347 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
MMP11P24347 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
MMP11P24347 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
MMP11P24347 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
MMP11P24347 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.78□□□□□ -0.04
MMP11P24347 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
MMP11P24347 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
MMP11P24347 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
MMP11P24347 TTTY23B-201ENST00000442790 549 ntBASIC14.78□□□□□ -0.04
MMP11P24347 SLED1-202ENST00000512051 380 ntBASIC14.78□□□□□ -0.04
MMP11P24347 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
MMP11P24347 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.78□□□□□ -0.04
MMP11P24347 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
MMP11P24347 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.78□□□□□ -0.04
MMP11P24347 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
MMP11P24347 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
MMP11P24347 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.78□□□□□ -0.04
MMP11P24347 AL008721.1-201ENST00000609964 604 ntBASIC14.78□□□□□ -0.04
MMP11P24347 AL033527.5-201ENST00000641382 801 ntBASIC14.78□□□□□ -0.04
MMP11P24347 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
MMP11P24347 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
MMP11P24347 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms