Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB3BP20337 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB3BP20337 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB3BP20337 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.71□□□□□ -0.21
RAB3BP20337 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RAB3BP20337 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.71□□□□□ -0.21
RAB3BP20337 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
RAB3BP20337 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.71□□□□□ -0.21
RAB3BP20337 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RAB3BP20337 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.71□□□□□ -0.21
RAB3BP20337 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB3BP20337 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
RAB3BP20337 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB3BP20337 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RAB3BP20337 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB3BP20337 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC13.71□□□□□ -0.21
RAB3BP20337 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC13.71□□□□□ -0.21
RAB3BP20337 POLD4-207ENST00000531239 584 ntTSL 2 BASIC13.71□□□□□ -0.21
RAB3BP20337 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.71□□□□□ -0.21
RAB3BP20337 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.71□□□□□ -0.21
RAB3BP20337 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RAB3BP20337 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB3BP20337 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.71□□□□□ -0.21
RAB3BP20337 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.71□□□□□ -0.21
RAB3BP20337 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RAB3BP20337 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB3BP20337 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.71□□□□□ -0.21
RAB3BP20337 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.71□□□□□ -0.21
RAB3BP20337 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB3BP20337 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
RAB3BP20337 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.71□□□□□ -0.21
RAB3BP20337 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB3BP20337 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RAB3BP20337 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RAB3BP20337 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RAB3BP20337 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
RAB3BP20337 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RAB3BP20337 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
RAB3BP20337 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
RAB3BP20337 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.71□□□□□ -0.22
RAB3BP20337 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
RAB3BP20337 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.71□□□□□ -0.22
RAB3BP20337 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.71□□□□□ -0.22
RAB3BP20337 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RAB3BP20337 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RAB3BP20337 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
RAB3BP20337 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RAB3BP20337 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RAB3BP20337 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
RAB3BP20337 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RAB3BP20337 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB3BP20337 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.7□□□□□ -0.22
RAB3BP20337 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB3BP20337 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.7□□□□□ -0.22
RAB3BP20337 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
RAB3BP20337 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RAB3BP20337 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
RAB3BP20337 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.7□□□□□ -0.22
RAB3BP20337 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.7□□□□□ -0.22
RAB3BP20337 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.7□□□□□ -0.22
RAB3BP20337 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RAB3BP20337 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.7□□□□□ -0.22
RAB3BP20337 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
RAB3BP20337 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RAB3BP20337 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB3BP20337 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
RAB3BP20337 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB3BP20337 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC13.7□□□□□ -0.22
RAB3BP20337 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RAB3BP20337 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC13.7□□□□□ -0.22
RAB3BP20337 RPL5P21-201ENST00000404620 815 ntBASIC13.7□□□□□ -0.22
RAB3BP20337 SLC4A1APP2-201ENST00000424054 1259 ntBASIC13.7□□□□□ -0.22
RAB3BP20337 KRT18P21-201ENST00000515767 1272 ntBASIC13.7□□□□□ -0.22
RAB3BP20337 AC061975.2-201ENST00000581722 295 ntBASIC13.7□□□□□ -0.22
RAB3BP20337 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC13.7□□□□□ -0.22
RAB3BP20337 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
RAB3BP20337 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.7□□□□□ -0.22
RAB3BP20337 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.7□□□□□ -0.22
RAB3BP20337 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RAB3BP20337 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.7□□□□□ -0.22
RAB3BP20337 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RAB3BP20337 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.7□□□□□ -0.22
RAB3BP20337 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RAB3BP20337 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RAB3BP20337 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.7□□□□□ -0.22
RAB3BP20337 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
RAB3BP20337 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.7□□□□□ -0.22
RAB3BP20337 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RAB3BP20337 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RAB3BP20337 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
RAB3BP20337 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
RAB3BP20337 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.7□□□□□ -0.22
RAB3BP20337 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB3BP20337 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB3BP20337 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB3BP20337 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB3BP20337 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
RAB3BP20337 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB3BP20337 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
RAB3BP20337 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms