Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.01■□□□□ 0.47
ATP2B1P20020 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.01■□□□□ 0.47
ATP2B1P20020 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.01■□□□□ 0.47
ATP2B1P20020 AF228730.6-201ENST00000641497 218 ntBASIC18.01■□□□□ 0.47
ATP2B1P20020 AC084121.3-201ENST00000641716 218 ntBASIC18.01■□□□□ 0.47
ATP2B1P20020 AL109936.8-201ENST00000641772 604 ntBASIC18.01■□□□□ 0.47
ATP2B1P20020 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC18.01■□□□□ 0.47
ATP2B1P20020 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2B1P20020 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2B1P20020 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2B1P20020 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
ATP2B1P20020 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2B1P20020 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
ATP2B1P20020 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2B1P20020 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2B1P20020 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2B1P20020 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2B1P20020 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2B1P20020 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
ATP2B1P20020 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2B1P20020 AC104640.1-201ENST00000562617 2109 ntBASIC18.01■□□□□ 0.47
ATP2B1P20020 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2B1P20020 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC18.01■□□□□ 0.47
ATP2B1P20020 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2B1P20020 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.01■□□□□ 0.47
ATP2B1P20020 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2B1P20020 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2B1P20020 TMBIM7P-203ENST00000641617 1718 ntBASIC18.01■□□□□ 0.47
ATP2B1P20020 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
ATP2B1P20020 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
ATP2B1P20020 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
ATP2B1P20020 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
ATP2B1P20020 CELP-203ENST00000624767 2414 ntTSL 5 BASIC18■□□□□ 0.47
ATP2B1P20020 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ATP2B1P20020 AC100757.3-201ENST00000622361 1406 ntBASIC18■□□□□ 0.47
ATP2B1P20020 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
ATP2B1P20020 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
ATP2B1P20020 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC18■□□□□ 0.47
ATP2B1P20020 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC18■□□□□ 0.47
ATP2B1P20020 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC18■□□□□ 0.47
ATP2B1P20020 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC18■□□□□ 0.47
ATP2B1P20020 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC18■□□□□ 0.47
ATP2B1P20020 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ATP2B1P20020 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18■□□□□ 0.47
ATP2B1P20020 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC18■□□□□ 0.47
ATP2B1P20020 AC044860.1-202ENST00000559481 777 ntBASIC18■□□□□ 0.47
ATP2B1P20020 AC010336.2-201ENST00000564226 506 ntBASIC18■□□□□ 0.47
ATP2B1P20020 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18■□□□□ 0.47
ATP2B1P20020 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
ATP2B1P20020 AL590560.3-201ENST00000623350 461 ntBASIC18■□□□□ 0.47
ATP2B1P20020 AL365209.1-201ENST00000624418 6473 ntBASIC18■□□□□ 0.47
ATP2B1P20020 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ATP2B1P20020 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
ATP2B1P20020 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
ATP2B1P20020 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC18■□□□□ 0.47
ATP2B1P20020 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
ATP2B1P20020 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC18■□□□□ 0.47
ATP2B1P20020 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ATP2B1P20020 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18■□□□□ 0.47
ATP2B1P20020 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
ATP2B1P20020 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ATP2B1P20020 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
ATP2B1P20020 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC18■□□□□ 0.47
ATP2B1P20020 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
ATP2B1P20020 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
ATP2B1P20020 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.99■□□□□ 0.47
ATP2B1P20020 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
ATP2B1P20020 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
ATP2B1P20020 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC17.99■□□□□ 0.47
ATP2B1P20020 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ATP2B1P20020 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
ATP2B1P20020 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
ATP2B1P20020 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ATP2B1P20020 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ATP2B1P20020 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ATP2B1P20020 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ATP2B1P20020 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
ATP2B1P20020 C18orf15-201ENST00000623680 2534 ntBASIC17.99■□□□□ 0.47
ATP2B1P20020 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.99■□□□□ 0.47
ATP2B1P20020 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
ATP2B1P20020 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
ATP2B1P20020 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ATP2B1P20020 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.99■□□□□ 0.47
ATP2B1P20020 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.99■□□□□ 0.47
ATP2B1P20020 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.99■□□□□ 0.47
ATP2B1P20020 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.99■□□□□ 0.47
ATP2B1P20020 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.99■□□□□ 0.47
ATP2B1P20020 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ATP2B1P20020 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.99■□□□□ 0.47
ATP2B1P20020 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ATP2B1P20020 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
ATP2B1P20020 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.99■□□□□ 0.47
ATP2B1P20020 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.99■□□□□ 0.47
ATP2B1P20020 AC025048.3-201ENST00000590609 569 ntBASIC17.99■□□□□ 0.47
ATP2B1P20020 LINC01115-203ENST00000606068 577 ntBASIC17.99■□□□□ 0.47
ATP2B1P20020 AC005702.4-201ENST00000618393 416 ntBASIC17.99■□□□□ 0.47
ATP2B1P20020 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
ATP2B1P20020 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ATP2B1P20020 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ATP2B1P20020 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 291.5 ms