Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC12.86□□□□□ -0.35
CCL3L1P16619 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC12.86□□□□□ -0.35
CCL3L1P16619 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CCL3L1P16619 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC12.86□□□□□ -0.35
CCL3L1P16619 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CCL3L1P16619 CLK3P2-201ENST00000427566 1453 ntBASIC12.86□□□□□ -0.35
CCL3L1P16619 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CCL3L1P16619 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC12.86□□□□□ -0.35
CCL3L1P16619 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC12.86□□□□□ -0.35
CCL3L1P16619 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC12.86□□□□□ -0.35
CCL3L1P16619 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CCL3L1P16619 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
CCL3L1P16619 AL133267.1-201ENST00000398220 340 ntBASIC12.86□□□□□ -0.35
CCL3L1P16619 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCL3L1P16619 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC12.86□□□□□ -0.35
CCL3L1P16619 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
CCL3L1P16619 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC12.86□□□□□ -0.35
CCL3L1P16619 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCL3L1P16619 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC12.86□□□□□ -0.35
CCL3L1P16619 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CCL3L1P16619 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC12.86□□□□□ -0.35
CCL3L1P16619 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC12.86□□□□□ -0.35
CCL3L1P16619 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC12.86□□□□□ -0.35
CCL3L1P16619 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
CCL3L1P16619 UBL5-208ENST00000593087 320 ntTSL 3 BASIC12.86□□□□□ -0.35
CCL3L1P16619 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
CCL3L1P16619 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC12.86□□□□□ -0.35
CCL3L1P16619 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
CCL3L1P16619 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC12.86□□□□□ -0.35
CCL3L1P16619 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCL3L1P16619 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CCL3L1P16619 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCL3L1P16619 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCL3L1P16619 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CCL3L1P16619 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCL3L1P16619 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC12.86□□□□□ -0.35
CCL3L1P16619 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CCL3L1P16619 AC013268.4-201ENST00000637413 2228 ntBASIC12.86□□□□□ -0.35
CCL3L1P16619 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC12.86□□□□□ -0.35
CCL3L1P16619 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCL3L1P16619 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCL3L1P16619 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCL3L1P16619 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC12.86□□□□□ -0.35
CCL3L1P16619 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC12.86□□□□□ -0.35
CCL3L1P16619 AL161772.1-201ENST00000610494 4412 ntBASIC12.86□□□□□ -0.35
CCL3L1P16619 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
CCL3L1P16619 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CCL3L1P16619 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCL3L1P16619 AC084364.1-201ENST00000551967 1556 ntBASIC12.86□□□□□ -0.35
CCL3L1P16619 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC12.86□□□□□ -0.35
CCL3L1P16619 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC12.85□□□□□ -0.35
CCL3L1P16619 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC12.85□□□□□ -0.35
CCL3L1P16619 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCL3L1P16619 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC12.85□□□□□ -0.35
CCL3L1P16619 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCL3L1P16619 CYP2AB1P-202ENST00000454440 1456 ntBASIC12.85□□□□□ -0.35
CCL3L1P16619 AC007541.1-201ENST00000570282 1469 ntBASIC12.85□□□□□ -0.35
CCL3L1P16619 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCL3L1P16619 AC126755.1-201ENST00000525846 6405 ntBASIC12.85□□□□□ -0.35
CCL3L1P16619 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CCL3L1P16619 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCL3L1P16619 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCL3L1P16619 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC12.85□□□□□ -0.35
CCL3L1P16619 AC092384.3-202ENST00000564646 2873 ntBASIC12.85□□□□□ -0.35
CCL3L1P16619 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCL3L1P16619 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC12.85□□□□□ -0.35
CCL3L1P16619 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCL3L1P16619 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCL3L1P16619 C18orf15-201ENST00000623680 2534 ntBASIC12.85□□□□□ -0.35
CCL3L1P16619 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
CCL3L1P16619 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CCL3L1P16619 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC12.85□□□□□ -0.35
CCL3L1P16619 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCL3L1P16619 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CCL3L1P16619 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CCL3L1P16619 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCL3L1P16619 GOLGA6L11P-201ENST00000417252 1298 ntBASIC12.85□□□□□ -0.35
CCL3L1P16619 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC12.85□□□□□ -0.35
CCL3L1P16619 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC12.85□□□□□ -0.35
CCL3L1P16619 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
CCL3L1P16619 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CCL3L1P16619 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC12.85□□□□□ -0.35
CCL3L1P16619 TERF1P3-201ENST00000505638 1227 ntBASIC12.85□□□□□ -0.35
CCL3L1P16619 AC093004.1-201ENST00000508850 424 ntBASIC12.85□□□□□ -0.35
CCL3L1P16619 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC12.85□□□□□ -0.35
CCL3L1P16619 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC12.85□□□□□ -0.35
CCL3L1P16619 GREM1-201ENST00000560677 623 ntTSL 4 BASIC12.85□□□□□ -0.35
CCL3L1P16619 RARRES2P5-201ENST00000564013 466 ntBASIC12.85□□□□□ -0.35
CCL3L1P16619 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC12.85□□□□□ -0.35
CCL3L1P16619 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC12.85□□□□□ -0.35
CCL3L1P16619 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC12.85□□□□□ -0.35
CCL3L1P16619 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CCL3L1P16619 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
CCL3L1P16619 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC12.85□□□□□ -0.35
CCL3L1P16619 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC12.85□□□□□ -0.35
CCL3L1P16619 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CCL3L1P16619 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CCL3L1P16619 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
CCL3L1P16619 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCL3L1P16619 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms