Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CCL4P13236 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.57□□□□□ -0.08
CCL4P13236 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCL4P13236 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCL4P13236 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CCL4P13236 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCL4P13236 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCL4P13236 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCL4P13236 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.57□□□□□ -0.08
CCL4P13236 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.57□□□□□ -0.08
CCL4P13236 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CCL4P13236 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCL4P13236 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCL4P13236 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCL4P13236 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCL4P13236 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
CCL4P13236 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCL4P13236 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CCL4P13236 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCL4P13236 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCL4P13236 SLC25A24P2-201ENST00000415059 510 ntBASIC14.57□□□□□ -0.08
CCL4P13236 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC14.57□□□□□ -0.08
CCL4P13236 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.57□□□□□ -0.08
CCL4P13236 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.57□□□□□ -0.08
CCL4P13236 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCL4P13236 AC004898.1-201ENST00000451057 766 ntBASIC14.57□□□□□ -0.08
CCL4P13236 IGHJ2P-201ENST00000454480 60 ntBASIC14.57□□□□□ -0.08
CCL4P13236 AKR7A2P1-201ENST00000460134 915 ntBASIC14.57□□□□□ -0.08
CCL4P13236 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCL4P13236 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCL4P13236 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC14.57□□□□□ -0.08
CCL4P13236 ACTG1P17-201ENST00000558391 1119 ntBASIC14.57□□□□□ -0.08
CCL4P13236 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CCL4P13236 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCL4P13236 AL021578.1-201ENST00000613646 709 ntBASIC14.57□□□□□ -0.08
CCL4P13236 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.57□□□□□ -0.08
CCL4P13236 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.57□□□□□ -0.08
CCL4P13236 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCL4P13236 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCL4P13236 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCL4P13236 AL023775.1-201ENST00000454907 1746 ntBASIC14.57□□□□□ -0.08
CCL4P13236 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCL4P13236 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.57□□□□□ -0.08
CCL4P13236 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCL4P13236 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCL4P13236 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCL4P13236 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCL4P13236 AC127383.1-201ENST00000444697 1800 ntBASIC14.57□□□□□ -0.08
CCL4P13236 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
CCL4P13236 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CCL4P13236 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.57□□□□□ -0.08
CCL4P13236 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCL4P13236 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCL4P13236 AC010491.1-201ENST00000563101 2797 ntBASIC14.56□□□□□ -0.08
CCL4P13236 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCL4P13236 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCL4P13236 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
CCL4P13236 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.56□□□□□ -0.08
CCL4P13236 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCL4P13236 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCL4P13236 AC024909.3-201ENST00000611513 2257 ntBASIC14.56□□□□□ -0.08
CCL4P13236 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCL4P13236 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCL4P13236 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.56□□□□□ -0.08
CCL4P13236 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCL4P13236 AC004945.1-201ENST00000416738 983 ntBASIC14.56□□□□□ -0.08
CCL4P13236 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14.56□□□□□ -0.08
CCL4P13236 FNTAP2-201ENST00000430308 634 ntBASIC14.56□□□□□ -0.08
CCL4P13236 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCL4P13236 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCL4P13236 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.56□□□□□ -0.08
CCL4P13236 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.56□□□□□ -0.08
CCL4P13236 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.56□□□□□ -0.08
CCL4P13236 PPA1-206ENST00000625364 644 ntTSL 5 BASIC14.56□□□□□ -0.08
CCL4P13236 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.56□□□□□ -0.08
CCL4P13236 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCL4P13236 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCL4P13236 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCL4P13236 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.56□□□□□ -0.08
CCL4P13236 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCL4P13236 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.56□□□□□ -0.08
CCL4P13236 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCL4P13236 AC092127.1-201ENST00000567093 3455 ntBASIC14.56□□□□□ -0.08
CCL4P13236 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCL4P13236 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.56□□□□□ -0.08
CCL4P13236 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCL4P13236 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCL4P13236 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.56□□□□□ -0.08
CCL4P13236 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCL4P13236 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
CCL4P13236 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCL4P13236 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCL4P13236 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
CCL4P13236 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CCL4P13236 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CCL4P13236 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCL4P13236 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCL4P13236 AL139384.1-201ENST00000612143 3047 ntBASIC14.55□□□□□ -0.08
CCL4P13236 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC14.55□□□□□ -0.08
CCL4P13236 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms