Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.37■□□□□ 0.21
RARAP10276 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RARAP10276 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RARAP10276 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RARAP10276 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RARAP10276 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RARAP10276 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RARAP10276 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RARAP10276 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RARAP10276 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
RARAP10276 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
RARAP10276 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
RARAP10276 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RARAP10276 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
RARAP10276 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RARAP10276 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
RARAP10276 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RARAP10276 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RARAP10276 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RARAP10276 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RARAP10276 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.36■□□□□ 0.21
RARAP10276 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.36■□□□□ 0.21
RARAP10276 AC073592.8-201ENST00000624126 511 ntBASIC16.36■□□□□ 0.21
RARAP10276 AC079416.2-201ENST00000625035 1193 ntBASIC16.36■□□□□ 0.21
RARAP10276 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
RARAP10276 Z97205.2-201ENST00000564697 1639 ntBASIC16.36■□□□□ 0.21
RARAP10276 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.36■□□□□ 0.21
RARAP10276 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.36■□□□□ 0.21
RARAP10276 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.36■□□□□ 0.21
RARAP10276 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
RARAP10276 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.36■□□□□ 0.21
RARAP10276 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RARAP10276 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
RARAP10276 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RARAP10276 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RARAP10276 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
RARAP10276 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.36■□□□□ 0.21
RARAP10276 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
RARAP10276 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RARAP10276 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RARAP10276 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.35■□□□□ 0.21
RARAP10276 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RARAP10276 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.35■□□□□ 0.21
RARAP10276 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
RARAP10276 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC16.35■□□□□ 0.21
RARAP10276 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.35■□□□□ 0.21
RARAP10276 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RARAP10276 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16.35■□□□□ 0.21
RARAP10276 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RARAP10276 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RARAP10276 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RARAP10276 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RARAP10276 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RARAP10276 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RARAP10276 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RARAP10276 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.35■□□□□ 0.21
RARAP10276 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RARAP10276 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RARAP10276 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.35■□□□□ 0.21
RARAP10276 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RARAP10276 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.35■□□□□ 0.21
RARAP10276 AC069120.2-201ENST00000524091 540 ntBASIC16.35■□□□□ 0.21
RARAP10276 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.35■□□□□ 0.21
RARAP10276 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.35■□□□□ 0.21
RARAP10276 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.35■□□□□ 0.21
RARAP10276 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RARAP10276 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.35■□□□□ 0.21
RARAP10276 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.35■□□□□ 0.21
RARAP10276 AC140878.1-201ENST00000565277 250 ntBASIC16.35■□□□□ 0.21
RARAP10276 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.35■□□□□ 0.21
RARAP10276 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.35■□□□□ 0.21
RARAP10276 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.35■□□□□ 0.21
RARAP10276 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.35■□□□□ 0.21
RARAP10276 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.35■□□□□ 0.21
RARAP10276 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RARAP10276 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RARAP10276 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RARAP10276 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RARAP10276 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.35■□□□□ 0.21
RARAP10276 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RARAP10276 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RARAP10276 AC007292.2-201ENST00000593524 1812 ntBASIC16.35■□□□□ 0.21
RARAP10276 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
RARAP10276 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RARAP10276 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RARAP10276 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RARAP10276 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.35■□□□□ 0.21
RARAP10276 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC16.34■□□□□ 0.21
RARAP10276 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RARAP10276 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
RARAP10276 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RARAP10276 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RARAP10276 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RARAP10276 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RARAP10276 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
RARAP10276 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.34■□□□□ 0.21
RARAP10276 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
RARAP10276 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RARAP10276 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RARAP10276 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms