Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FREM3P0C091 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.12□□□□□ -0.15
FREM3P0C091 PTP4A1P2-201ENST00000546033 454 ntBASIC14.12□□□□□ -0.15
FREM3P0C091 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.12□□□□□ -0.15
FREM3P0C091 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.12□□□□□ -0.15
FREM3P0C091 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.12□□□□□ -0.15
FREM3P0C091 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.12□□□□□ -0.15
FREM3P0C091 AC244669.2-201ENST00000612320 853 ntBASIC14.12□□□□□ -0.15
FREM3P0C091 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.12□□□□□ -0.15
FREM3P0C091 AL645728.2-202ENST00000641679 227 ntBASIC14.12□□□□□ -0.15
FREM3P0C091 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
FREM3P0C091 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.12□□□□□ -0.15
FREM3P0C091 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FREM3P0C091 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
FREM3P0C091 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
FREM3P0C091 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
FREM3P0C091 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
FREM3P0C091 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FREM3P0C091 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FREM3P0C091 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
FREM3P0C091 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
FREM3P0C091 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FREM3P0C091 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
FREM3P0C091 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FREM3P0C091 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
FREM3P0C091 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.11□□□□□ -0.15
FREM3P0C091 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
FREM3P0C091 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
FREM3P0C091 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FREM3P0C091 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FREM3P0C091 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
FREM3P0C091 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.11□□□□□ -0.15
FREM3P0C091 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.11□□□□□ -0.15
FREM3P0C091 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.11□□□□□ -0.15
FREM3P0C091 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.11□□□□□ -0.15
FREM3P0C091 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.11□□□□□ -0.15
FREM3P0C091 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.11□□□□□ -0.15
FREM3P0C091 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.11□□□□□ -0.15
FREM3P0C091 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.11□□□□□ -0.15
FREM3P0C091 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.11□□□□□ -0.15
FREM3P0C091 AC015936.2-201ENST00000593177 259 ntBASIC14.11□□□□□ -0.15
FREM3P0C091 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.11□□□□□ -0.15
FREM3P0C091 AC133539.2-201ENST00000604757 467 ntBASIC14.11□□□□□ -0.15
FREM3P0C091 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FREM3P0C091 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FREM3P0C091 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
FREM3P0C091 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FREM3P0C091 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.11□□□□□ -0.15
FREM3P0C091 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
FREM3P0C091 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FREM3P0C091 AC093525.8-201ENST00000624099 1342 ntBASIC14.11□□□□□ -0.15
FREM3P0C091 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.11□□□□□ -0.15
FREM3P0C091 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FREM3P0C091 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
FREM3P0C091 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FREM3P0C091 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.11□□□□□ -0.15
FREM3P0C091 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FREM3P0C091 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FREM3P0C091 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.11□□□□□ -0.15
FREM3P0C091 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
FREM3P0C091 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
FREM3P0C091 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
FREM3P0C091 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
FREM3P0C091 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
FREM3P0C091 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
FREM3P0C091 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
FREM3P0C091 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.11□□□□□ -0.15
FREM3P0C091 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FREM3P0C091 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.11□□□□□ -0.15
FREM3P0C091 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
FREM3P0C091 VDAC1P7-201ENST00000462417 847 ntBASIC14.11□□□□□ -0.15
FREM3P0C091 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
FREM3P0C091 AC022137.2-201ENST00000503482 481 ntBASIC14.11□□□□□ -0.15
FREM3P0C091 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.11□□□□□ -0.15
FREM3P0C091 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
FREM3P0C091 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.11□□□□□ -0.15
FREM3P0C091 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.11□□□□□ -0.15
FREM3P0C091 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
FREM3P0C091 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
FREM3P0C091 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FREM3P0C091 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
FREM3P0C091 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FREM3P0C091 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FREM3P0C091 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.1□□□□□ -0.15
FREM3P0C091 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FREM3P0C091 AC018665.1-201ENST00000622927 1362 ntBASIC14.1□□□□□ -0.15
FREM3P0C091 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
FREM3P0C091 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.1□□□□□ -0.15
FREM3P0C091 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.1□□□□□ -0.15
FREM3P0C091 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
FREM3P0C091 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
FREM3P0C091 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FREM3P0C091 AC023824.1-201ENST00000562945 2975 ntBASIC14.1□□□□□ -0.15
FREM3P0C091 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
FREM3P0C091 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
FREM3P0C091 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
FREM3P0C091 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
FREM3P0C091 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
FREM3P0C091 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FREM3P0C091 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms