Protein–RNA interactions for Protein: P08F94

PKHD1, Fibrocystin, humanhuman

Predictions only

Length 4,074 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1P08F94 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
PKHD1P08F94 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC9.68□□□□□ -0.86
PKHD1P08F94 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC9.68□□□□□ -0.86
PKHD1P08F94 SERBP1P2-201ENST00000436888 1164 ntBASIC9.68□□□□□ -0.86
PKHD1P08F94 NEU3-207ENST00000534628 746 ntTSL 2 BASIC9.68□□□□□ -0.86
PKHD1P08F94 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC9.68□□□□□ -0.86
PKHD1P08F94 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
PKHD1P08F94 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
PKHD1P08F94 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
PKHD1P08F94 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
PKHD1P08F94 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC9.68□□□□□ -0.86
PKHD1P08F94 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC9.68□□□□□ -0.86
PKHD1P08F94 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
PKHD1P08F94 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
PKHD1P08F94 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
PKHD1P08F94 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
PKHD1P08F94 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
PKHD1P08F94 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
PKHD1P08F94 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC9.67□□□□□ -0.86
PKHD1P08F94 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
PKHD1P08F94 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
PKHD1P08F94 GCSHP3-201ENST00000431120 391 ntBASIC9.67□□□□□ -0.86
PKHD1P08F94 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC9.67□□□□□ -0.86
PKHD1P08F94 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC9.67□□□□□ -0.86
PKHD1P08F94 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC9.67□□□□□ -0.86
PKHD1P08F94 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC9.67□□□□□ -0.86
PKHD1P08F94 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC9.67□□□□□ -0.86
PKHD1P08F94 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC9.67□□□□□ -0.86
PKHD1P08F94 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
PKHD1P08F94 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
PKHD1P08F94 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
PKHD1P08F94 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
PKHD1P08F94 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
PKHD1P08F94 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
PKHD1P08F94 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC9.67□□□□□ -0.86
PKHD1P08F94 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC9.67□□□□□ -0.86
PKHD1P08F94 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
PKHD1P08F94 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC9.67□□□□□ -0.86
PKHD1P08F94 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
PKHD1P08F94 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
PKHD1P08F94 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
PKHD1P08F94 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC9.67□□□□□ -0.86
PKHD1P08F94 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC9.67□□□□□ -0.86
PKHD1P08F94 TSPY25P-201ENST00000429463 745 ntBASIC9.67□□□□□ -0.86
PKHD1P08F94 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC9.67□□□□□ -0.86
PKHD1P08F94 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC9.67□□□□□ -0.86
PKHD1P08F94 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC9.67□□□□□ -0.86
PKHD1P08F94 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
PKHD1P08F94 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
PKHD1P08F94 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
PKHD1P08F94 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
PKHD1P08F94 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
PKHD1P08F94 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
PKHD1P08F94 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
PKHD1P08F94 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
PKHD1P08F94 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
PKHD1P08F94 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
PKHD1P08F94 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
PKHD1P08F94 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
PKHD1P08F94 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
PKHD1P08F94 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC9.67□□□□□ -0.86
PKHD1P08F94 AC093752.3-201ENST00000567343 901 ntBASIC9.67□□□□□ -0.86
PKHD1P08F94 PHBP15-201ENST00000574228 665 ntBASIC9.67□□□□□ -0.86
PKHD1P08F94 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC9.67□□□□□ -0.86
PKHD1P08F94 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
PKHD1P08F94 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
PKHD1P08F94 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
PKHD1P08F94 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
PKHD1P08F94 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
PKHD1P08F94 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
PKHD1P08F94 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC9.66□□□□□ -0.86
PKHD1P08F94 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC9.66□□□□□ -0.86
PKHD1P08F94 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC9.66□□□□□ -0.86
PKHD1P08F94 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC9.66□□□□□ -0.86
PKHD1P08F94 AL603764.1-201ENST00000636452 321 ntBASIC9.66□□□□□ -0.86
PKHD1P08F94 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
PKHD1P08F94 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC9.66□□□□□ -0.86
PKHD1P08F94 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC9.66□□□□□ -0.86
PKHD1P08F94 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
PKHD1P08F94 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
PKHD1P08F94 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
PKHD1P08F94 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
PKHD1P08F94 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
PKHD1P08F94 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC9.66□□□□□ -0.86
PKHD1P08F94 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC9.66□□□□□ -0.86
PKHD1P08F94 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
PKHD1P08F94 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
PKHD1P08F94 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
PKHD1P08F94 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC9.66□□□□□ -0.86
PKHD1P08F94 AP003680.1-201ENST00000598970 3660 ntBASIC9.66□□□□□ -0.86
PKHD1P08F94 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
PKHD1P08F94 NCR3-202ENST00000376071 541 ntTSL 5 BASIC9.66□□□□□ -0.86
PKHD1P08F94 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
PKHD1P08F94 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC9.66□□□□□ -0.86
PKHD1P08F94 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC9.66□□□□□ -0.86
PKHD1P08F94 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC9.66□□□□□ -0.86
PKHD1P08F94 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC9.66□□□□□ -0.86
PKHD1P08F94 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC9.66□□□□□ -0.86
PKHD1P08F94 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC9.66□□□□□ -0.86
PKHD1P08F94 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms