Protein–RNA interactions for Protein: P07333

CSF1R, Macrophage colony-stimulating factor 1 receptor, humanhuman

Predictions only

Length 972 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1RP07333 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CSF1RP07333 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CSF1RP07333 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CSF1RP07333 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC18.9■□□□□ 0.62
CSF1RP07333 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CSF1RP07333 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CSF1RP07333 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CSF1RP07333 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CSF1RP07333 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CSF1RP07333 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CSF1RP07333 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CSF1RP07333 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CSF1RP07333 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CSF1RP07333 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC18.9■□□□□ 0.62
CSF1RP07333 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC18.9■□□□□ 0.62
CSF1RP07333 FAM8A4P-201ENST00000435433 1213 ntBASIC18.9■□□□□ 0.62
CSF1RP07333 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CSF1RP07333 RPSAP36-202ENST00000494591 1261 ntBASIC18.9■□□□□ 0.62
CSF1RP07333 FAM8A2P-201ENST00000528813 1142 ntBASIC18.9■□□□□ 0.62
CSF1RP07333 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC18.9■□□□□ 0.62
CSF1RP07333 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CSF1RP07333 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CSF1RP07333 CYGB-203ENST00000589145 788 ntTSL 3 BASIC18.9■□□□□ 0.62
CSF1RP07333 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC18.9■□□□□ 0.62
CSF1RP07333 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC18.9■□□□□ 0.62
CSF1RP07333 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC18.9■□□□□ 0.62
CSF1RP07333 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CSF1RP07333 AC055811.4-201ENST00000624039 1754 ntBASIC18.9■□□□□ 0.62
CSF1RP07333 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC18.9■□□□□ 0.62
CSF1RP07333 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CSF1RP07333 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CSF1RP07333 AC020907.1-201ENST00000616460 1350 ntBASIC18.9■□□□□ 0.62
CSF1RP07333 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CSF1RP07333 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CSF1RP07333 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC18.9■□□□□ 0.62
CSF1RP07333 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CSF1RP07333 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CSF1RP07333 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CSF1RP07333 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC18.89■□□□□ 0.62
CSF1RP07333 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC18.89■□□□□ 0.62
CSF1RP07333 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CSF1RP07333 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
CSF1RP07333 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CSF1RP07333 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CSF1RP07333 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CSF1RP07333 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.89■□□□□ 0.61
CSF1RP07333 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CSF1RP07333 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CSF1RP07333 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CSF1RP07333 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC18.89■□□□□ 0.61
CSF1RP07333 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC18.89■□□□□ 0.61
CSF1RP07333 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CSF1RP07333 Z93015.1-201ENST00000451718 390 ntBASIC18.89■□□□□ 0.61
CSF1RP07333 MESTP3-201ENST00000503460 968 ntBASIC18.89■□□□□ 0.61
CSF1RP07333 AC026434.2-201ENST00000506094 1078 ntBASIC18.89■□□□□ 0.61
CSF1RP07333 CD74-212ENST00000524315 584 ntTSL 5 BASIC18.89■□□□□ 0.61
CSF1RP07333 EMC4-209ENST00000559421 497 ntTSL 2 BASIC18.89■□□□□ 0.61
CSF1RP07333 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC18.89■□□□□ 0.61
CSF1RP07333 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC18.89■□□□□ 0.61
CSF1RP07333 AC091271.1-201ENST00000611877 1162 ntBASIC18.89■□□□□ 0.61
CSF1RP07333 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CSF1RP07333 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CSF1RP07333 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CSF1RP07333 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CSF1RP07333 AL354989.2-201ENST00000435838 1540 ntBASIC18.89■□□□□ 0.61
CSF1RP07333 AC015818.8-201ENST00000587907 1519 ntBASIC18.89■□□□□ 0.61
CSF1RP07333 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CSF1RP07333 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CSF1RP07333 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC18.89■□□□□ 0.61
CSF1RP07333 ANKRD30BP2-201ENST00000435744 1610 ntBASIC18.89■□□□□ 0.61
CSF1RP07333 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CSF1RP07333 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CSF1RP07333 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CSF1RP07333 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CSF1RP07333 AC112693.3-201ENST00000624819 1983 ntBASIC18.88■□□□□ 0.61
CSF1RP07333 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CSF1RP07333 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CSF1RP07333 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC18.88■□□□□ 0.61
CSF1RP07333 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CSF1RP07333 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CSF1RP07333 SNX21-203ENST00000372541 771 ntTSL 2 BASIC18.88■□□□□ 0.61
CSF1RP07333 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CSF1RP07333 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CSF1RP07333 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
CSF1RP07333 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC18.88■□□□□ 0.61
CSF1RP07333 AC106820.3-201ENST00000561653 397 ntBASIC18.88■□□□□ 0.61
CSF1RP07333 EEF1DP1-201ENST00000585891 896 ntBASIC18.88■□□□□ 0.61
CSF1RP07333 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC18.88■□□□□ 0.61
CSF1RP07333 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC18.88■□□□□ 0.61
CSF1RP07333 PRKN-211ENST00000615065 261 ntTSL 5 BASIC18.88■□□□□ 0.61
CSF1RP07333 CLUHP2-201ENST00000426660 1303 ntBASIC18.88■□□□□ 0.61
CSF1RP07333 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CSF1RP07333 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CSF1RP07333 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.88■□□□□ 0.61
CSF1RP07333 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CSF1RP07333 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CSF1RP07333 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CSF1RP07333 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CSF1RP07333 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC18.88■□□□□ 0.61
CSF1RP07333 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms