Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGN1P05114 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
HMGN1P05114 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.17□□□□□ -0.14
HMGN1P05114 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGN1P05114 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.17□□□□□ -0.14
HMGN1P05114 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HMGN1P05114 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGN1P05114 AC026748.1-201ENST00000624349 3251 ntBASIC14.17□□□□□ -0.14
HMGN1P05114 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGN1P05114 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGN1P05114 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.17□□□□□ -0.14
HMGN1P05114 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
HMGN1P05114 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGN1P05114 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.17□□□□□ -0.14
HMGN1P05114 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.17□□□□□ -0.14
HMGN1P05114 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.17□□□□□ -0.14
HMGN1P05114 AL513190.1-201ENST00000621254 727 ntBASIC14.17□□□□□ -0.14
HMGN1P05114 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGN1P05114 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
HMGN1P05114 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGN1P05114 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
HMGN1P05114 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGN1P05114 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGN1P05114 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
HMGN1P05114 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGN1P05114 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGN1P05114 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGN1P05114 AJ011931.1-201ENST00000618749 2492 ntBASIC14.17□□□□□ -0.14
HMGN1P05114 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HMGN1P05114 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGN1P05114 HLA-A-201ENST00000376802 1334 ntBASIC14.16□□□□□ -0.14
HMGN1P05114 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HMGN1P05114 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMGN1P05114 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMGN1P05114 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMGN1P05114 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
HMGN1P05114 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMGN1P05114 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.16□□□□□ -0.14
HMGN1P05114 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
HMGN1P05114 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMGN1P05114 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
HMGN1P05114 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HMGN1P05114 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.16□□□□□ -0.14
HMGN1P05114 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
HMGN1P05114 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HMGN1P05114 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
HMGN1P05114 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMGN1P05114 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HMGN1P05114 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
HMGN1P05114 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HMGN1P05114 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HMGN1P05114 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.16□□□□□ -0.14
HMGN1P05114 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HMGN1P05114 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.16□□□□□ -0.14
HMGN1P05114 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.16□□□□□ -0.14
HMGN1P05114 RNA5SP416-201ENST00000516838 111 ntBASIC14.16□□□□□ -0.14
HMGN1P05114 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.16□□□□□ -0.14
HMGN1P05114 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.16□□□□□ -0.14
HMGN1P05114 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.16□□□□□ -0.14
HMGN1P05114 KRT8P23-201ENST00000560090 1207 ntBASIC14.16□□□□□ -0.14
HMGN1P05114 AP000842.3-202ENST00000569238 1080 ntBASIC14.16□□□□□ -0.14
HMGN1P05114 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.16□□□□□ -0.14
HMGN1P05114 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.16□□□□□ -0.14
HMGN1P05114 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.16□□□□□ -0.14
HMGN1P05114 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
HMGN1P05114 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HMGN1P05114 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
HMGN1P05114 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
HMGN1P05114 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
HMGN1P05114 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMGN1P05114 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
HMGN1P05114 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.16□□□□□ -0.14
HMGN1P05114 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HMGN1P05114 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMGN1P05114 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.16□□□□□ -0.14
HMGN1P05114 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMGN1P05114 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMGN1P05114 LINC00552-201ENST00000625151 2579 ntBASIC14.16□□□□□ -0.14
HMGN1P05114 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMGN1P05114 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HMGN1P05114 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMGN1P05114 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMGN1P05114 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.15□□□□□ -0.14
HMGN1P05114 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMGN1P05114 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMGN1P05114 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.15□□□□□ -0.14
HMGN1P05114 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.15□□□□□ -0.14
HMGN1P05114 AC007686.3-201ENST00000619017 3487 ntBASIC14.15□□□□□ -0.14
HMGN1P05114 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.15□□□□□ -0.14
HMGN1P05114 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
HMGN1P05114 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
HMGN1P05114 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HMGN1P05114 AL607033.1-201ENST00000623900 1599 ntBASIC14.15□□□□□ -0.14
HMGN1P05114 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMGN1P05114 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
HMGN1P05114 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
HMGN1P05114 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.15□□□□□ -0.14
HMGN1P05114 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMGN1P05114 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMGN1P05114 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms