Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC11.9□□□□□ -0.5
TCRAP04437 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TCRAP04437 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TCRAP04437 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC11.9□□□□□ -0.5
TCRAP04437 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
TCRAP04437 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
TCRAP04437 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TCRAP04437 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TCRAP04437 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TCRAP04437 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TCRAP04437 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC11.9□□□□□ -0.5
TCRAP04437 CRCP-205ENST00000431089 942 ntTSL 2 BASIC11.9□□□□□ -0.5
TCRAP04437 AC098831.1-202ENST00000438821 336 ntBASIC11.9□□□□□ -0.5
TCRAP04437 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC11.9□□□□□ -0.5
TCRAP04437 AC009947.1-201ENST00000444350 727 ntBASIC11.9□□□□□ -0.5
TCRAP04437 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC11.9□□□□□ -0.5
TCRAP04437 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC11.9□□□□□ -0.5
TCRAP04437 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC11.9□□□□□ -0.5
TCRAP04437 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC11.9□□□□□ -0.5
TCRAP04437 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC11.9□□□□□ -0.5
TCRAP04437 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC11.9□□□□□ -0.5
TCRAP04437 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC11.9□□□□□ -0.5
TCRAP04437 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
TCRAP04437 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
TCRAP04437 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC11.9□□□□□ -0.5
TCRAP04437 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
TCRAP04437 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC11.9□□□□□ -0.5
TCRAP04437 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
TCRAP04437 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC11.9□□□□□ -0.5
TCRAP04437 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC11.9□□□□□ -0.5
TCRAP04437 AL121912.1-201ENST00000603683 238 ntBASIC11.9□□□□□ -0.5
TCRAP04437 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC11.9□□□□□ -0.5
TCRAP04437 AQP6-205ENST00000618286 829 ntTSL 5 BASIC11.9□□□□□ -0.5
TCRAP04437 AC148477.8-201ENST00000624298 468 ntBASIC11.9□□□□□ -0.5
TCRAP04437 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC11.9□□□□□ -0.5
TCRAP04437 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC11.9□□□□□ -0.5
TCRAP04437 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
TCRAP04437 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TCRAP04437 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TCRAP04437 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TCRAP04437 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC11.9□□□□□ -0.5
TCRAP04437 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
TCRAP04437 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
TCRAP04437 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC11.9□□□□□ -0.5
TCRAP04437 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC11.9□□□□□ -0.5
TCRAP04437 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TCRAP04437 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TCRAP04437 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC11.9□□□□□ -0.5
TCRAP04437 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
TCRAP04437 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
TCRAP04437 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
TCRAP04437 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
TCRAP04437 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC11.89□□□□□ -0.51
TCRAP04437 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
TCRAP04437 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC11.89□□□□□ -0.51
TCRAP04437 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC11.89□□□□□ -0.51
TCRAP04437 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TCRAP04437 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TCRAP04437 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC11.89□□□□□ -0.51
TCRAP04437 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC11.89□□□□□ -0.51
TCRAP04437 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
TCRAP04437 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TCRAP04437 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC11.89□□□□□ -0.51
TCRAP04437 CYP4F24P-201ENST00000586049 1580 ntBASIC11.89□□□□□ -0.51
TCRAP04437 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
TCRAP04437 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
TCRAP04437 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TCRAP04437 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TCRAP04437 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TCRAP04437 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC11.89□□□□□ -0.51
TCRAP04437 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TCRAP04437 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TCRAP04437 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC11.89□□□□□ -0.51
TCRAP04437 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
TCRAP04437 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
TCRAP04437 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
TCRAP04437 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC11.89□□□□□ -0.51
TCRAP04437 EEF1DP4-201ENST00000446006 880 ntBASIC11.89□□□□□ -0.51
TCRAP04437 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TCRAP04437 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
TCRAP04437 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TCRAP04437 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC11.89□□□□□ -0.51
TCRAP04437 COQ9-214ENST00000567933 882 ntTSL 3 BASIC11.89□□□□□ -0.51
TCRAP04437 AL138918.1-201ENST00000568306 659 ntBASIC11.89□□□□□ -0.51
TCRAP04437 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TCRAP04437 OS9-204ENST00000389146 2091 ntTSL 2 BASIC11.89□□□□□ -0.51
TCRAP04437 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC11.89□□□□□ -0.51
TCRAP04437 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TCRAP04437 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
TCRAP04437 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TCRAP04437 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
TCRAP04437 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
TCRAP04437 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
TCRAP04437 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
TCRAP04437 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TCRAP04437 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC11.89□□□□□ -0.51
TCRAP04437 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TCRAP04437 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
TCRAP04437 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
TCRAP04437 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms