Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC13.98□□□□□ -0.17
APOA1P02647 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOA1P02647 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
APOA1P02647 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.97□□□□□ -0.17
APOA1P02647 AC027612.1-201ENST00000445234 2395 ntBASIC13.97□□□□□ -0.17
APOA1P02647 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOA1P02647 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOA1P02647 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOA1P02647 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOA1P02647 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
APOA1P02647 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOA1P02647 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.97□□□□□ -0.17
APOA1P02647 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.97□□□□□ -0.17
APOA1P02647 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOA1P02647 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.97□□□□□ -0.17
APOA1P02647 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.97□□□□□ -0.17
APOA1P02647 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
APOA1P02647 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOA1P02647 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.97□□□□□ -0.17
APOA1P02647 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOA1P02647 NSUN5P1-202ENST00000421140 1535 ntBASIC13.97□□□□□ -0.17
APOA1P02647 NSUN5P2-203ENST00000457352 1529 ntBASIC13.97□□□□□ -0.17
APOA1P02647 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.97□□□□□ -0.17
APOA1P02647 AC099521.3-201ENST00000624251 2938 ntBASIC13.97□□□□□ -0.17
APOA1P02647 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOA1P02647 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOA1P02647 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
APOA1P02647 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOA1P02647 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
APOA1P02647 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOA1P02647 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOA1P02647 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC13.97□□□□□ -0.17
APOA1P02647 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
APOA1P02647 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
APOA1P02647 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC13.97□□□□□ -0.17
APOA1P02647 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
APOA1P02647 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOA1P02647 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOA1P02647 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
APOA1P02647 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
APOA1P02647 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
APOA1P02647 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOA1P02647 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOA1P02647 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.97□□□□□ -0.17
APOA1P02647 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.97□□□□□ -0.17
APOA1P02647 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOA1P02647 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
APOA1P02647 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
APOA1P02647 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOA1P02647 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
APOA1P02647 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOA1P02647 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOA1P02647 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.96□□□□□ -0.17
APOA1P02647 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC13.96□□□□□ -0.17
APOA1P02647 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
APOA1P02647 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
APOA1P02647 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOA1P02647 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOA1P02647 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.96□□□□□ -0.17
APOA1P02647 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOA1P02647 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOA1P02647 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.96□□□□□ -0.17
APOA1P02647 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
APOA1P02647 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOA1P02647 ZBED1P1-201ENST00000502364 1930 ntBASIC13.96□□□□□ -0.17
APOA1P02647 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.96□□□□□ -0.17
APOA1P02647 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.96□□□□□ -0.17
APOA1P02647 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
APOA1P02647 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
APOA1P02647 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC13.96□□□□□ -0.17
APOA1P02647 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
APOA1P02647 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.96□□□□□ -0.17
APOA1P02647 POM121L3P-201ENST00000419331 1163 ntBASIC13.96□□□□□ -0.17
APOA1P02647 FAM8A3P-201ENST00000427218 844 ntBASIC13.96□□□□□ -0.17
APOA1P02647 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOA1P02647 KRT17P6-201ENST00000453795 1220 ntBASIC13.96□□□□□ -0.17
APOA1P02647 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.96□□□□□ -0.17
APOA1P02647 AL121672.3-201ENST00000608644 468 ntBASIC13.96□□□□□ -0.17
APOA1P02647 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.96□□□□□ -0.17
APOA1P02647 AL589182.2-201ENST00000619332 1049 ntBASIC13.96□□□□□ -0.17
APOA1P02647 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC13.96□□□□□ -0.17
APOA1P02647 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC13.96□□□□□ -0.17
APOA1P02647 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOA1P02647 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOA1P02647 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOA1P02647 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOA1P02647 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOA1P02647 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
APOA1P02647 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.96□□□□□ -0.18
APOA1P02647 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
APOA1P02647 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.96□□□□□ -0.18
APOA1P02647 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.96□□□□□ -0.18
APOA1P02647 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.96□□□□□ -0.18
APOA1P02647 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
APOA1P02647 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
APOA1P02647 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
APOA1P02647 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
APOA1P02647 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
APOA1P02647 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
APOA1P02647 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms