Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC12.28□□□□□ -0.44
TOMM40O96008 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TOMM40O96008 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TOMM40O96008 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TOMM40O96008 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TOMM40O96008 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TOMM40O96008 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TOMM40O96008 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC12.28□□□□□ -0.44
TOMM40O96008 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TOMM40O96008 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TOMM40O96008 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
TOMM40O96008 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TOMM40O96008 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
TOMM40O96008 MYO15B-237ENST00000642007 4893 ntBASIC12.27□□□□□ -0.44
TOMM40O96008 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
TOMM40O96008 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC12.27□□□□□ -0.44
TOMM40O96008 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC12.27□□□□□ -0.44
TOMM40O96008 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC12.27□□□□□ -0.44
TOMM40O96008 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
TOMM40O96008 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
TOMM40O96008 AP3S2-216ENST00000617003 1561 ntBASIC12.27□□□□□ -0.44
TOMM40O96008 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC12.27□□□□□ -0.44
TOMM40O96008 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC12.27□□□□□ -0.44
TOMM40O96008 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TOMM40O96008 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TOMM40O96008 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
TOMM40O96008 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TOMM40O96008 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC12.27□□□□□ -0.45
TOMM40O96008 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
TOMM40O96008 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
TOMM40O96008 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
TOMM40O96008 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TOMM40O96008 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC12.27□□□□□ -0.45
TOMM40O96008 MKNK2P1-201ENST00000437526 628 ntBASIC12.27□□□□□ -0.45
TOMM40O96008 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC12.27□□□□□ -0.45
TOMM40O96008 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
TOMM40O96008 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC12.27□□□□□ -0.45
TOMM40O96008 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC12.27□□□□□ -0.45
TOMM40O96008 SLC25A39P2-201ENST00000537614 270 ntBASIC12.27□□□□□ -0.45
TOMM40O96008 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TOMM40O96008 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TOMM40O96008 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TOMM40O96008 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
TOMM40O96008 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TOMM40O96008 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
TOMM40O96008 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC12.27□□□□□ -0.45
TOMM40O96008 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TOMM40O96008 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
TOMM40O96008 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TOMM40O96008 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TOMM40O96008 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
TOMM40O96008 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TOMM40O96008 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
TOMM40O96008 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TOMM40O96008 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC12.27□□□□□ -0.45
TOMM40O96008 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC12.27□□□□□ -0.45
TOMM40O96008 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
TOMM40O96008 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TOMM40O96008 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC12.27□□□□□ -0.45
TOMM40O96008 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC12.27□□□□□ -0.45
TOMM40O96008 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TOMM40O96008 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
TOMM40O96008 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
TOMM40O96008 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TOMM40O96008 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
TOMM40O96008 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TOMM40O96008 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TOMM40O96008 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
TOMM40O96008 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
TOMM40O96008 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TOMM40O96008 AC106881.1-201ENST00000605849 3329 ntBASIC12.26□□□□□ -0.45
TOMM40O96008 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC12.26□□□□□ -0.45
TOMM40O96008 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC12.26□□□□□ -0.45
TOMM40O96008 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
TOMM40O96008 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
TOMM40O96008 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
TOMM40O96008 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC12.26□□□□□ -0.45
TOMM40O96008 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
TOMM40O96008 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TOMM40O96008 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TOMM40O96008 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
TOMM40O96008 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TOMM40O96008 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
TOMM40O96008 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TOMM40O96008 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TOMM40O96008 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TOMM40O96008 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TOMM40O96008 IMP4-203ENST00000409935 958 ntTSL 5 BASIC12.26□□□□□ -0.45
TOMM40O96008 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC12.26□□□□□ -0.45
TOMM40O96008 AC004832.2-201ENST00000426397 482 ntBASIC12.26□□□□□ -0.45
TOMM40O96008 AL592309.1-201ENST00000443127 649 ntBASIC12.26□□□□□ -0.45
TOMM40O96008 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TOMM40O96008 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC12.26□□□□□ -0.45
TOMM40O96008 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC12.26□□□□□ -0.45
TOMM40O96008 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC12.26□□□□□ -0.45
TOMM40O96008 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC12.26□□□□□ -0.45
TOMM40O96008 HNRNPUP1-201ENST00000554987 333 ntBASIC12.26□□□□□ -0.45
TOMM40O96008 RARRES2P9-201ENST00000565168 469 ntBASIC12.26□□□□□ -0.45
TOMM40O96008 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC12.26□□□□□ -0.45
TOMM40O96008 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms