Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE6O95741 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE6O95741 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.32■□□□□ 0.04
CPNE6O95741 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.32■□□□□ 0.04
CPNE6O95741 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CPNE6O95741 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.32■□□□□ 0.04
CPNE6O95741 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.32■□□□□ 0.04
CPNE6O95741 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE6O95741 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE6O95741 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.32■□□□□ 0.04
CPNE6O95741 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.32■□□□□ 0.04
CPNE6O95741 BNIP3P1-202ENST00000550043 1585 ntBASIC15.32■□□□□ 0.04
CPNE6O95741 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE6O95741 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CPNE6O95741 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE6O95741 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CPNE6O95741 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE6O95741 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.31■□□□□ 0.04
CPNE6O95741 AC112504.1-201ENST00000623415 1841 ntBASIC15.31■□□□□ 0.04
CPNE6O95741 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE6O95741 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE6O95741 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE6O95741 AC023908.3-201ENST00000564211 3047 ntBASIC15.31■□□□□ 0.04
CPNE6O95741 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE6O95741 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE6O95741 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.31■□□□□ 0.04
CPNE6O95741 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.31■□□□□ 0.04
CPNE6O95741 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CPNE6O95741 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE6O95741 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE6O95741 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE6O95741 RPL13P2-201ENST00000440687 659 ntBASIC15.31■□□□□ 0.04
CPNE6O95741 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE6O95741 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.31■□□□□ 0.04
CPNE6O95741 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.31■□□□□ 0.04
CPNE6O95741 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.31■□□□□ 0.04
CPNE6O95741 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.31■□□□□ 0.04
CPNE6O95741 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.31■□□□□ 0.04
CPNE6O95741 AC015936.2-201ENST00000593177 259 ntBASIC15.31■□□□□ 0.04
CPNE6O95741 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CPNE6O95741 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE6O95741 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE6O95741 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.31■□□□□ 0.04
CPNE6O95741 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE6O95741 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE6O95741 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.31■□□□□ 0.04
CPNE6O95741 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE6O95741 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE6O95741 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.31■□□□□ 0.04
CPNE6O95741 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.31■□□□□ 0.04
CPNE6O95741 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CPNE6O95741 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.31■□□□□ 0.04
CPNE6O95741 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE6O95741 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CPNE6O95741 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.31■□□□□ 0.04
CPNE6O95741 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.31■□□□□ 0.04
CPNE6O95741 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE6O95741 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.3■□□□□ 0.04
CPNE6O95741 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE6O95741 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE6O95741 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE6O95741 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
CPNE6O95741 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE6O95741 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE6O95741 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE6O95741 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE6O95741 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CPNE6O95741 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE6O95741 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE6O95741 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE6O95741 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE6O95741 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.3■□□□□ 0.04
CPNE6O95741 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE6O95741 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CPNE6O95741 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE6O95741 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.3■□□□□ 0.04
CPNE6O95741 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE6O95741 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
CPNE6O95741 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
CPNE6O95741 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.3■□□□□ 0.04
CPNE6O95741 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.3■□□□□ 0.04
CPNE6O95741 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.3■□□□□ 0.04
CPNE6O95741 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE6O95741 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.3■□□□□ 0.04
CPNE6O95741 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE6O95741 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.3■□□□□ 0.04
CPNE6O95741 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.3■□□□□ 0.04
CPNE6O95741 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.3■□□□□ 0.04
CPNE6O95741 AP001282.1-201ENST00000531301 1499 ntBASIC15.3■□□□□ 0.04
CPNE6O95741 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE6O95741 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE6O95741 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.3■□□□□ 0.04
CPNE6O95741 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE6O95741 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.3■□□□□ 0.04
CPNE6O95741 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.3■□□□□ 0.04
CPNE6O95741 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CPNE6O95741 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CPNE6O95741 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.3■□□□□ 0.04
CPNE6O95741 AL391069.4-201ENST00000609583 481 ntBASIC15.3■□□□□ 0.04
CPNE6O95741 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms