Protein–RNA interactions for Protein: O95696

BRD1, Bromodomain-containing protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD1O95696 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.17■□□□□ 0.5
BRD1O95696 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.17■□□□□ 0.5
BRD1O95696 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BRD1O95696 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
BRD1O95696 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
BRD1O95696 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BRD1O95696 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.17■□□□□ 0.5
BRD1O95696 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BRD1O95696 UCKL1-AS1-201ENST00000623569 3602 ntBASIC18.17■□□□□ 0.5
BRD1O95696 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
BRD1O95696 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BRD1O95696 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BRD1O95696 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BRD1O95696 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BRD1O95696 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
BRD1O95696 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BRD1O95696 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BRD1O95696 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
BRD1O95696 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC18.16■□□□□ 0.5
BRD1O95696 AC139749.1-202ENST00000617529 3139 ntBASIC18.16■□□□□ 0.5
BRD1O95696 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.16■□□□□ 0.5
BRD1O95696 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
BRD1O95696 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
BRD1O95696 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
BRD1O95696 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
BRD1O95696 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
BRD1O95696 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BRD1O95696 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
BRD1O95696 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BRD1O95696 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BRD1O95696 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BRD1O95696 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
BRD1O95696 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
BRD1O95696 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.16■□□□□ 0.5
BRD1O95696 AC004461.1-201ENST00000412461 403 ntBASIC18.16■□□□□ 0.5
BRD1O95696 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.16■□□□□ 0.5
BRD1O95696 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
BRD1O95696 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.16■□□□□ 0.5
BRD1O95696 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BRD1O95696 SLC25A39P2-201ENST00000537614 270 ntBASIC18.16■□□□□ 0.5
BRD1O95696 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
BRD1O95696 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
BRD1O95696 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.16■□□□□ 0.5
BRD1O95696 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC18.16■□□□□ 0.5
BRD1O95696 MIR4745-201ENST00000577608 62 ntBASIC18.16■□□□□ 0.5
BRD1O95696 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.16■□□□□ 0.5
BRD1O95696 AC005498.2-205ENST00000593218 784 ntBASIC18.16■□□□□ 0.5
BRD1O95696 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
BRD1O95696 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
BRD1O95696 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BRD1O95696 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
BRD1O95696 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BRD1O95696 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.15■□□□□ 0.5
BRD1O95696 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BRD1O95696 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BRD1O95696 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BRD1O95696 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BRD1O95696 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BRD1O95696 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BRD1O95696 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BRD1O95696 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
BRD1O95696 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
BRD1O95696 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
BRD1O95696 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC18.15■□□□□ 0.5
BRD1O95696 SPDYE11-202ENST00000450699 704 ntBASIC18.15■□□□□ 0.5
BRD1O95696 TAF8-206ENST00000472818 719 ntTSL 2 BASIC18.15■□□□□ 0.5
BRD1O95696 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BRD1O95696 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.15■□□□□ 0.5
BRD1O95696 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.15■□□□□ 0.5
BRD1O95696 RARRES2P9-201ENST00000565168 469 ntBASIC18.15■□□□□ 0.5
BRD1O95696 SPDYE9P-201ENST00000570642 692 ntBASIC18.15■□□□□ 0.5
BRD1O95696 SPDYE10P-202ENST00000612005 668 ntBASIC18.15■□□□□ 0.5
BRD1O95696 SPDYE8P-202ENST00000612377 668 ntBASIC18.15■□□□□ 0.5
BRD1O95696 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
BRD1O95696 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BRD1O95696 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BRD1O95696 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BRD1O95696 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BRD1O95696 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BRD1O95696 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.15■□□□□ 0.5
BRD1O95696 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC18.15■□□□□ 0.5
BRD1O95696 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
BRD1O95696 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC18.15■□□□□ 0.5
BRD1O95696 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BRD1O95696 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
BRD1O95696 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
BRD1O95696 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
BRD1O95696 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC18.15■□□□□ 0.5
BRD1O95696 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BRD1O95696 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BRD1O95696 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
BRD1O95696 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
BRD1O95696 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
BRD1O95696 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
BRD1O95696 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC18.14■□□□□ 0.5
BRD1O95696 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC18.14■□□□□ 0.5
BRD1O95696 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
BRD1O95696 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
BRD1O95696 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
BRD1O95696 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms