Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PPP1R3DO95685 AC013726.1-201ENST00000563747 2285 ntBASIC14.13□□□□□ -0.15
PPP1R3DO95685 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PPP1R3DO95685 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PPP1R3DO95685 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.13□□□□□ -0.15
PPP1R3DO95685 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PPP1R3DO95685 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
PPP1R3DO95685 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.13□□□□□ -0.15
PPP1R3DO95685 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PPP1R3DO95685 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PPP1R3DO95685 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PPP1R3DO95685 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
PPP1R3DO95685 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
PPP1R3DO95685 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PPP1R3DO95685 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PPP1R3DO95685 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
PPP1R3DO95685 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
PPP1R3DO95685 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PPP1R3DO95685 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PPP1R3DO95685 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PPP1R3DO95685 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PPP1R3DO95685 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.12□□□□□ -0.15
PPP1R3DO95685 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
PPP1R3DO95685 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.12□□□□□ -0.15
PPP1R3DO95685 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.12□□□□□ -0.15
PPP1R3DO95685 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PPP1R3DO95685 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
PPP1R3DO95685 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
PPP1R3DO95685 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
PPP1R3DO95685 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.12□□□□□ -0.15
PPP1R3DO95685 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PPP1R3DO95685 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PPP1R3DO95685 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
PPP1R3DO95685 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PPP1R3DO95685 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PPP1R3DO95685 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PPP1R3DO95685 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.12□□□□□ -0.15
PPP1R3DO95685 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PPP1R3DO95685 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PPP1R3DO95685 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.12□□□□□ -0.15
PPP1R3DO95685 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.12□□□□□ -0.15
PPP1R3DO95685 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.12□□□□□ -0.15
PPP1R3DO95685 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.12□□□□□ -0.15
PPP1R3DO95685 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.12□□□□□ -0.15
PPP1R3DO95685 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.12□□□□□ -0.15
PPP1R3DO95685 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.12□□□□□ -0.15
PPP1R3DO95685 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.12□□□□□ -0.15
PPP1R3DO95685 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
PPP1R3DO95685 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PPP1R3DO95685 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PPP1R3DO95685 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
PPP1R3DO95685 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.12□□□□□ -0.15
PPP1R3DO95685 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PPP1R3DO95685 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PPP1R3DO95685 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PPP1R3DO95685 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PPP1R3DO95685 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PPP1R3DO95685 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
PPP1R3DO95685 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
PPP1R3DO95685 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PPP1R3DO95685 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PPP1R3DO95685 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PPP1R3DO95685 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
PPP1R3DO95685 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PPP1R3DO95685 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.11□□□□□ -0.15
PPP1R3DO95685 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PPP1R3DO95685 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PPP1R3DO95685 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PPP1R3DO95685 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.11□□□□□ -0.15
PPP1R3DO95685 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PPP1R3DO95685 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PPP1R3DO95685 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.11□□□□□ -0.15
PPP1R3DO95685 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.11□□□□□ -0.15
PPP1R3DO95685 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
PPP1R3DO95685 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PPP1R3DO95685 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.11□□□□□ -0.15
PPP1R3DO95685 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PPP1R3DO95685 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.11□□□□□ -0.15
PPP1R3DO95685 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
PPP1R3DO95685 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.11□□□□□ -0.15
PPP1R3DO95685 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PPP1R3DO95685 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PPP1R3DO95685 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.11□□□□□ -0.15
PPP1R3DO95685 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PPP1R3DO95685 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
PPP1R3DO95685 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
PPP1R3DO95685 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
PPP1R3DO95685 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PPP1R3DO95685 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PPP1R3DO95685 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.11□□□□□ -0.15
PPP1R3DO95685 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.11□□□□□ -0.15
PPP1R3DO95685 AP000347.1-202ENST00000435868 847 ntBASIC14.11□□□□□ -0.15
PPP1R3DO95685 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PPP1R3DO95685 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PPP1R3DO95685 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.11□□□□□ -0.15
PPP1R3DO95685 AC005829.1-201ENST00000570002 483 ntBASIC14.11□□□□□ -0.15
PPP1R3DO95685 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.11□□□□□ -0.15
PPP1R3DO95685 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.11□□□□□ -0.15
PPP1R3DO95685 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.11□□□□□ -0.15
PPP1R3DO95685 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms