Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH8O95206 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH8O95206 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PCDH8O95206 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH8O95206 AC134312.5-201ENST00000568031 1313 ntBASIC15.54■□□□□ 0.08
PCDH8O95206 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH8O95206 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PCDH8O95206 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.54■□□□□ 0.08
PCDH8O95206 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH8O95206 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH8O95206 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.54■□□□□ 0.08
PCDH8O95206 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH8O95206 BAATP1-201ENST00000412284 1225 ntBASIC15.54■□□□□ 0.08
PCDH8O95206 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PCDH8O95206 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
PCDH8O95206 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
PCDH8O95206 AC093433.1-201ENST00000458048 571 ntBASIC15.54■□□□□ 0.08
PCDH8O95206 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH8O95206 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.54■□□□□ 0.08
PCDH8O95206 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
PCDH8O95206 AC104989.1-201ENST00000519711 778 ntBASIC15.54■□□□□ 0.08
PCDH8O95206 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.54■□□□□ 0.08
PCDH8O95206 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.54■□□□□ 0.08
PCDH8O95206 AP005482.1-201ENST00000563722 1273 ntBASIC15.54■□□□□ 0.08
PCDH8O95206 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
PCDH8O95206 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
PCDH8O95206 MIR6775-201ENST00000617557 69 ntBASIC15.54■□□□□ 0.08
PCDH8O95206 AC005252.2-201ENST00000624630 1141 ntBASIC15.54■□□□□ 0.08
PCDH8O95206 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH8O95206 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
PCDH8O95206 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH8O95206 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH8O95206 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.54■□□□□ 0.08
PCDH8O95206 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.54■□□□□ 0.08
PCDH8O95206 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.54■□□□□ 0.08
PCDH8O95206 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH8O95206 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH8O95206 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH8O95206 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
PCDH8O95206 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PCDH8O95206 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH8O95206 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PCDH8O95206 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH8O95206 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH8O95206 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.53■□□□□ 0.08
PCDH8O95206 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
PCDH8O95206 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH8O95206 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH8O95206 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.53■□□□□ 0.08
PCDH8O95206 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH8O95206 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH8O95206 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH8O95206 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH8O95206 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
PCDH8O95206 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
PCDH8O95206 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH8O95206 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
PCDH8O95206 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH8O95206 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH8O95206 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH8O95206 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH8O95206 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
PCDH8O95206 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
PCDH8O95206 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
PCDH8O95206 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH8O95206 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.53■□□□□ 0.08
PCDH8O95206 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.53■□□□□ 0.08
PCDH8O95206 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH8O95206 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.53■□□□□ 0.08
PCDH8O95206 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH8O95206 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.53■□□□□ 0.08
PCDH8O95206 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.53■□□□□ 0.08
PCDH8O95206 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.53■□□□□ 0.08
PCDH8O95206 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
PCDH8O95206 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
PCDH8O95206 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.53■□□□□ 0.08
PCDH8O95206 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.53■□□□□ 0.08
PCDH8O95206 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.53■□□□□ 0.08
PCDH8O95206 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.53■□□□□ 0.08
PCDH8O95206 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.53■□□□□ 0.08
PCDH8O95206 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH8O95206 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
PCDH8O95206 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.53■□□□□ 0.08
PCDH8O95206 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH8O95206 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH8O95206 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.53■□□□□ 0.08
PCDH8O95206 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH8O95206 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.53■□□□□ 0.08
PCDH8O95206 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
PCDH8O95206 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
PCDH8O95206 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
PCDH8O95206 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.53■□□□□ 0.08
PCDH8O95206 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.53■□□□□ 0.08
PCDH8O95206 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDH8O95206 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
PCDH8O95206 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDH8O95206 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.52■□□□□ 0.08
PCDH8O95206 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDH8O95206 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.52■□□□□ 0.08
PCDH8O95206 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms