Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 HSPA12A-201ENST00000369209 5722 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
PFDN1O60925 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PFDN1O60925 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PFDN1O60925 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC13.89□□□□□ -0.19
PFDN1O60925 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
PFDN1O60925 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PFDN1O60925 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC13.89□□□□□ -0.19
PFDN1O60925 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
PFDN1O60925 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.89□□□□□ -0.19
PFDN1O60925 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC13.89□□□□□ -0.19
PFDN1O60925 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
PFDN1O60925 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC13.89□□□□□ -0.19
PFDN1O60925 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC13.88□□□□□ -0.19
PFDN1O60925 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.88□□□□□ -0.19
PFDN1O60925 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.88□□□□□ -0.19
PFDN1O60925 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
PFDN1O60925 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PFDN1O60925 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.88□□□□□ -0.19
PFDN1O60925 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PFDN1O60925 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PFDN1O60925 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PFDN1O60925 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PFDN1O60925 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
PFDN1O60925 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
PFDN1O60925 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PFDN1O60925 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PFDN1O60925 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PFDN1O60925 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC13.88□□□□□ -0.19
PFDN1O60925 TBC1D13-202ENST00000372648 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PFDN1O60925 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PFDN1O60925 ME3-201ENST00000323418 1068 ntTSL 5 BASIC13.88□□□□□ -0.19
PFDN1O60925 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC13.88□□□□□ -0.19
PFDN1O60925 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PFDN1O60925 KSR1P1-201ENST00000446298 240 ntBASIC13.88□□□□□ -0.19
PFDN1O60925 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC13.88□□□□□ -0.19
PFDN1O60925 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC13.88□□□□□ -0.19
PFDN1O60925 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC13.88□□□□□ -0.19
PFDN1O60925 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.88□□□□□ -0.19
PFDN1O60925 AC010240.3-201ENST00000607688 395 ntBASIC13.88□□□□□ -0.19
PFDN1O60925 AC010654.1-201ENST00000615722 808 ntBASIC13.88□□□□□ -0.19
PFDN1O60925 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PFDN1O60925 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PFDN1O60925 FAM102A-202ENST00000373084 3352 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PFDN1O60925 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
PFDN1O60925 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
PFDN1O60925 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PFDN1O60925 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PFDN1O60925 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.88□□□□□ -0.19
PFDN1O60925 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PFDN1O60925 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
PFDN1O60925 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PFDN1O60925 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC13.88□□□□□ -0.19
PFDN1O60925 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PFDN1O60925 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PFDN1O60925 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PFDN1O60925 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PFDN1O60925 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
PFDN1O60925 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PFDN1O60925 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC13.87□□□□□ -0.19
PFDN1O60925 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC13.87□□□□□ -0.19
PFDN1O60925 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PFDN1O60925 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PFDN1O60925 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC13.87□□□□□ -0.19
PFDN1O60925 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PFDN1O60925 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PFDN1O60925 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PFDN1O60925 PI4KAP2-211ENST00000486209 3213 ntTSL 5 BASIC13.87□□□□□ -0.19
PFDN1O60925 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PFDN1O60925 GLP1R-201ENST00000373256 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PFDN1O60925 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PFDN1O60925 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PFDN1O60925 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.87□□□□□ -0.19
PFDN1O60925 PACSIN1-207ENST00000620693 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PFDN1O60925 AC092117.1-201ENST00000621230 3250 ntBASIC13.87□□□□□ -0.19
PFDN1O60925 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PFDN1O60925 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
PFDN1O60925 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PFDN1O60925 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
PFDN1O60925 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PFDN1O60925 AL592424.1-201ENST00000563624 1536 ntBASIC13.87□□□□□ -0.19
PFDN1O60925 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.87□□□□□ -0.19
PFDN1O60925 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PFDN1O60925 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PFDN1O60925 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC13.87□□□□□ -0.19
PFDN1O60925 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PFDN1O60925 KRT18P29-201ENST00000397031 1267 ntBASIC13.87□□□□□ -0.19
PFDN1O60925 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.87□□□□□ -0.19
PFDN1O60925 CNP-204ENST00000472031 1019 ntTSL 2 BASIC13.87□□□□□ -0.19
PFDN1O60925 TMEM198B-204ENST00000484016 896 ntBASIC13.87□□□□□ -0.19
PFDN1O60925 AC113404.2-201ENST00000507884 177 ntBASIC13.87□□□□□ -0.19
PFDN1O60925 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC13.87□□□□□ -0.19
PFDN1O60925 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC13.87□□□□□ -0.19
PFDN1O60925 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PFDN1O60925 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC13.87□□□□□ -0.19
PFDN1O60925 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC13.87□□□□□ -0.19
PFDN1O60925 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC13.87□□□□□ -0.19
PFDN1O60925 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PFDN1O60925 MIR4674-201ENST00000582457 87 ntBASIC13.87□□□□□ -0.19
PFDN1O60925 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC13.87□□□□□ -0.19
PFDN1O60925 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms