Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.9□□□□□ -0.02
LCMT2O60294 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
LCMT2O60294 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LCMT2O60294 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LCMT2O60294 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
LCMT2O60294 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.9□□□□□ -0.02
LCMT2O60294 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LCMT2O60294 AC138035.3-201ENST00000622706 2791 ntBASIC14.9□□□□□ -0.02
LCMT2O60294 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
LCMT2O60294 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LCMT2O60294 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LCMT2O60294 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LCMT2O60294 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LCMT2O60294 TSPY26P-202ENST00000565928 3884 ntBASIC14.89□□□□□ -0.03
LCMT2O60294 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
LCMT2O60294 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.89□□□□□ -0.03
LCMT2O60294 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.89□□□□□ -0.03
LCMT2O60294 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.89□□□□□ -0.03
LCMT2O60294 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LCMT2O60294 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
LCMT2O60294 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LCMT2O60294 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.89□□□□□ -0.03
LCMT2O60294 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LCMT2O60294 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LCMT2O60294 PIN1P1-201ENST00000412108 996 ntBASIC14.89□□□□□ -0.03
LCMT2O60294 AL353779.1-201ENST00000434793 351 ntBASIC14.89□□□□□ -0.03
LCMT2O60294 AC055876.2-201ENST00000531834 546 ntBASIC14.89□□□□□ -0.03
LCMT2O60294 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.89□□□□□ -0.03
LCMT2O60294 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LCMT2O60294 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.89□□□□□ -0.03
LCMT2O60294 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.89□□□□□ -0.03
LCMT2O60294 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
LCMT2O60294 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LCMT2O60294 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.89□□□□□ -0.03
LCMT2O60294 CICP11-201ENST00000434745 2827 ntBASIC14.89□□□□□ -0.03
LCMT2O60294 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LCMT2O60294 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
LCMT2O60294 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
LCMT2O60294 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LCMT2O60294 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LCMT2O60294 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LCMT2O60294 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LCMT2O60294 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
LCMT2O60294 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LCMT2O60294 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LCMT2O60294 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LCMT2O60294 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LCMT2O60294 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LCMT2O60294 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LCMT2O60294 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
LCMT2O60294 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LCMT2O60294 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LCMT2O60294 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.89□□□□□ -0.03
LCMT2O60294 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.89□□□□□ -0.03
LCMT2O60294 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.89□□□□□ -0.03
LCMT2O60294 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
LCMT2O60294 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.88□□□□□ -0.03
LCMT2O60294 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
LCMT2O60294 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LCMT2O60294 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LCMT2O60294 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.88□□□□□ -0.03
LCMT2O60294 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.88□□□□□ -0.03
LCMT2O60294 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LCMT2O60294 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LCMT2O60294 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
LCMT2O60294 AC144831.1-201ENST00000573312 2656 ntBASIC14.88□□□□□ -0.03
LCMT2O60294 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LCMT2O60294 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LCMT2O60294 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LCMT2O60294 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.88□□□□□ -0.03
LCMT2O60294 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LCMT2O60294 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
LCMT2O60294 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
LCMT2O60294 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.88□□□□□ -0.03
LCMT2O60294 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
LCMT2O60294 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.88□□□□□ -0.03
LCMT2O60294 AC190387.1-201ENST00000551683 408 ntBASIC14.88□□□□□ -0.03
LCMT2O60294 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.88□□□□□ -0.03
LCMT2O60294 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
LCMT2O60294 AC099568.2-201ENST00000609194 695 ntBASIC14.88□□□□□ -0.03
LCMT2O60294 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LCMT2O60294 AL662799.1-202ENST00000614205 422 ntBASIC14.88□□□□□ -0.03
LCMT2O60294 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.88□□□□□ -0.03
LCMT2O60294 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.88□□□□□ -0.03
LCMT2O60294 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LCMT2O60294 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LCMT2O60294 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LCMT2O60294 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.88□□□□□ -0.03
LCMT2O60294 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.88□□□□□ -0.03
LCMT2O60294 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LCMT2O60294 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LCMT2O60294 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
LCMT2O60294 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LCMT2O60294 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LCMT2O60294 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.88□□□□□ -0.03
LCMT2O60294 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LCMT2O60294 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
LCMT2O60294 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
LCMT2O60294 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LCMT2O60294 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms