Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.93□□□□□ -0.18
CXCL13O43927 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
CXCL13O43927 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC13.93□□□□□ -0.18
CXCL13O43927 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.93□□□□□ -0.18
CXCL13O43927 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC13.93□□□□□ -0.18
CXCL13O43927 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CXCL13O43927 INTS4P2-202ENST00000614726 2019 ntBASIC13.93□□□□□ -0.18
CXCL13O43927 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
CXCL13O43927 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CXCL13O43927 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CXCL13O43927 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CXCL13O43927 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CXCL13O43927 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CXCL13O43927 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CXCL13O43927 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CXCL13O43927 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CXCL13O43927 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CXCL13O43927 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CXCL13O43927 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CXCL13O43927 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CXCL13O43927 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CXCL13O43927 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CXCL13O43927 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.92□□□□□ -0.18
CXCL13O43927 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CXCL13O43927 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CXCL13O43927 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CXCL13O43927 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CXCL13O43927 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC13.92□□□□□ -0.18
CXCL13O43927 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CXCL13O43927 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
CXCL13O43927 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.92□□□□□ -0.18
CXCL13O43927 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CXCL13O43927 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CXCL13O43927 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CXCL13O43927 COX5BP8-201ENST00000416911 349 ntBASIC13.92□□□□□ -0.18
CXCL13O43927 AC005034.1-201ENST00000426657 489 ntBASIC13.92□□□□□ -0.18
CXCL13O43927 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.92□□□□□ -0.18
CXCL13O43927 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CXCL13O43927 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.92□□□□□ -0.18
CXCL13O43927 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC13.92□□□□□ -0.18
CXCL13O43927 AC011495.1-201ENST00000498085 584 ntBASIC13.92□□□□□ -0.18
CXCL13O43927 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
CXCL13O43927 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.92□□□□□ -0.18
CXCL13O43927 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.92□□□□□ -0.18
CXCL13O43927 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.92□□□□□ -0.18
CXCL13O43927 AC120045.2-201ENST00000567334 178 ntBASIC13.92□□□□□ -0.18
CXCL13O43927 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.92□□□□□ -0.18
CXCL13O43927 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC13.92□□□□□ -0.18
CXCL13O43927 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.92□□□□□ -0.18
CXCL13O43927 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.92□□□□□ -0.18
CXCL13O43927 AL033527.5-201ENST00000641382 801 ntBASIC13.92□□□□□ -0.18
CXCL13O43927 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CXCL13O43927 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC13.92□□□□□ -0.18
CXCL13O43927 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CXCL13O43927 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CXCL13O43927 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CXCL13O43927 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CXCL13O43927 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CXCL13O43927 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CXCL13O43927 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.92□□□□□ -0.18
CXCL13O43927 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CXCL13O43927 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CXCL13O43927 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CXCL13O43927 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CXCL13O43927 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CXCL13O43927 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CXCL13O43927 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CXCL13O43927 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CXCL13O43927 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CXCL13O43927 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC13.91□□□□□ -0.18
CXCL13O43927 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CXCL13O43927 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CXCL13O43927 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CXCL13O43927 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CXCL13O43927 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CXCL13O43927 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CXCL13O43927 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CXCL13O43927 AC087481.3-201ENST00000602886 1894 ntBASIC13.91□□□□□ -0.18
CXCL13O43927 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.91□□□□□ -0.18
CXCL13O43927 AC020658.6-201ENST00000623564 1870 ntBASIC13.91□□□□□ -0.18
CXCL13O43927 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CXCL13O43927 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CXCL13O43927 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CXCL13O43927 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CXCL13O43927 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CXCL13O43927 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CXCL13O43927 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.91□□□□□ -0.18
CXCL13O43927 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.91□□□□□ -0.18
CXCL13O43927 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CXCL13O43927 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CXCL13O43927 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.91□□□□□ -0.18
CXCL13O43927 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CXCL13O43927 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CXCL13O43927 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
CXCL13O43927 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC13.91□□□□□ -0.18
CXCL13O43927 C1QBPP1-201ENST00000400117 770 ntBASIC13.91□□□□□ -0.18
CXCL13O43927 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CXCL13O43927 NME2P1-201ENST00000426182 414 ntBASIC13.91□□□□□ -0.18
CXCL13O43927 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.91□□□□□ -0.18
CXCL13O43927 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 191 ms