Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC11.75□□□□□ -0.53
SNAI2O43623 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC11.75□□□□□ -0.53
SNAI2O43623 TSPY19P-201ENST00000418461 509 ntBASIC11.75□□□□□ -0.53
SNAI2O43623 TSPY18P-201ENST00000441642 509 ntBASIC11.75□□□□□ -0.53
SNAI2O43623 CXCL1P1-201ENST00000502804 216 ntBASIC11.75□□□□□ -0.53
SNAI2O43623 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SNAI2O43623 AC109635.5-201ENST00000533593 962 ntBASIC11.75□□□□□ -0.53
SNAI2O43623 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC11.75□□□□□ -0.53
SNAI2O43623 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC11.75□□□□□ -0.53
SNAI2O43623 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC11.75□□□□□ -0.53
SNAI2O43623 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC11.75□□□□□ -0.53
SNAI2O43623 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC11.75□□□□□ -0.53
SNAI2O43623 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SNAI2O43623 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC11.75□□□□□ -0.53
SNAI2O43623 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
SNAI2O43623 ILF3-AS1-201ENST00000591501 1983 ntBASIC11.75□□□□□ -0.53
SNAI2O43623 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC11.75□□□□□ -0.53
SNAI2O43623 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
SNAI2O43623 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SNAI2O43623 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SNAI2O43623 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SNAI2O43623 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SNAI2O43623 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
SNAI2O43623 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
SNAI2O43623 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
SNAI2O43623 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
SNAI2O43623 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SNAI2O43623 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SNAI2O43623 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
SNAI2O43623 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC11.75□□□□□ -0.53
SNAI2O43623 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SNAI2O43623 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SNAI2O43623 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SNAI2O43623 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC11.75□□□□□ -0.53
SNAI2O43623 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SNAI2O43623 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SNAI2O43623 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SNAI2O43623 AC092127.1-201ENST00000567093 3455 ntBASIC11.74□□□□□ -0.53
SNAI2O43623 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SNAI2O43623 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SNAI2O43623 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC11.74□□□□□ -0.53
SNAI2O43623 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC11.74□□□□□ -0.53
SNAI2O43623 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SNAI2O43623 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC11.74□□□□□ -0.53
SNAI2O43623 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC11.74□□□□□ -0.53
SNAI2O43623 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SNAI2O43623 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
SNAI2O43623 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SNAI2O43623 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SNAI2O43623 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC11.74□□□□□ -0.53
SNAI2O43623 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SNAI2O43623 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
SNAI2O43623 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SNAI2O43623 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SNAI2O43623 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
SNAI2O43623 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC11.74□□□□□ -0.53
SNAI2O43623 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC11.74□□□□□ -0.53
SNAI2O43623 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
SNAI2O43623 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
SNAI2O43623 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SNAI2O43623 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
SNAI2O43623 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SNAI2O43623 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SNAI2O43623 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SNAI2O43623 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
SNAI2O43623 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC11.74□□□□□ -0.53
SNAI2O43623 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SNAI2O43623 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SNAI2O43623 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SNAI2O43623 AKR1C7P-201ENST00000305623 895 ntBASIC11.74□□□□□ -0.53
SNAI2O43623 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
SNAI2O43623 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SNAI2O43623 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC11.74□□□□□ -0.53
SNAI2O43623 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC11.74□□□□□ -0.53
SNAI2O43623 RPS2P1-201ENST00000434010 821 ntBASIC11.74□□□□□ -0.53
SNAI2O43623 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC11.74□□□□□ -0.53
SNAI2O43623 FIS1-203ENST00000442303 631 ntTSL 3 BASIC11.74□□□□□ -0.53
SNAI2O43623 AC108073.2-201ENST00000464002 357 ntBASIC11.74□□□□□ -0.53
SNAI2O43623 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC11.74□□□□□ -0.53
SNAI2O43623 AC091304.2-201ENST00000564639 760 ntBASIC11.74□□□□□ -0.53
SNAI2O43623 MIR3652-201ENST00000579335 131 ntBASIC11.74□□□□□ -0.53
SNAI2O43623 AL356488.2-201ENST00000602755 427 ntBASIC11.74□□□□□ -0.53
SNAI2O43623 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC11.74□□□□□ -0.53
SNAI2O43623 AC008735.5-201ENST00000623544 497 ntBASIC11.74□□□□□ -0.53
SNAI2O43623 AC005593.1-201ENST00000624894 515 ntBASIC11.74□□□□□ -0.53
SNAI2O43623 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC11.74□□□□□ -0.53
SNAI2O43623 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
SNAI2O43623 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
SNAI2O43623 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SNAI2O43623 KRT8P44-201ENST00000441609 1350 ntBASIC11.74□□□□□ -0.53
SNAI2O43623 AC131212.3-201ENST00000624087 4219 ntBASIC11.74□□□□□ -0.53
SNAI2O43623 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SNAI2O43623 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
SNAI2O43623 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SNAI2O43623 AC126365.1-201ENST00000578585 1514 ntBASIC11.74□□□□□ -0.53
SNAI2O43623 AL589702.1-201ENST00000641229 1509 ntBASIC11.74□□□□□ -0.53
SNAI2O43623 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SNAI2O43623 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SNAI2O43623 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SNAI2O43623 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms