Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.55■□□□□ 0.08
MID1O15344 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MID1O15344 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.55■□□□□ 0.08
MID1O15344 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.55■□□□□ 0.08
MID1O15344 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.55■□□□□ 0.08
MID1O15344 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
MID1O15344 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.55■□□□□ 0.08
MID1O15344 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.55■□□□□ 0.08
MID1O15344 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MID1O15344 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.55■□□□□ 0.08
MID1O15344 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MID1O15344 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MID1O15344 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.55■□□□□ 0.08
MID1O15344 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
MID1O15344 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MID1O15344 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MID1O15344 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MID1O15344 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MID1O15344 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MID1O15344 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
MID1O15344 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.55■□□□□ 0.08
MID1O15344 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.55■□□□□ 0.08
MID1O15344 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MID1O15344 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC15.55■□□□□ 0.08
MID1O15344 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MID1O15344 KRT18P25-201ENST00000508931 1278 ntBASIC15.55■□□□□ 0.08
MID1O15344 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MID1O15344 AL583810.1-201ENST00000553344 1045 ntBASIC15.55■□□□□ 0.08
MID1O15344 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.55■□□□□ 0.08
MID1O15344 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.55■□□□□ 0.08
MID1O15344 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
MID1O15344 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MID1O15344 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
MID1O15344 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.55■□□□□ 0.08
MID1O15344 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MID1O15344 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.55■□□□□ 0.08
MID1O15344 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MID1O15344 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.55■□□□□ 0.08
MID1O15344 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MID1O15344 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MID1O15344 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
MID1O15344 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MID1O15344 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MID1O15344 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MID1O15344 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MID1O15344 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.54■□□□□ 0.08
MID1O15344 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.54■□□□□ 0.08
MID1O15344 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MID1O15344 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.54■□□□□ 0.08
MID1O15344 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MID1O15344 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MID1O15344 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
MID1O15344 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.54■□□□□ 0.08
MID1O15344 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
MID1O15344 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MID1O15344 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.54■□□□□ 0.08
MID1O15344 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MID1O15344 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.54■□□□□ 0.08
MID1O15344 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.54■□□□□ 0.08
MID1O15344 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.54■□□□□ 0.08
MID1O15344 AL391005.1-201ENST00000623953 2435 ntBASIC15.54■□□□□ 0.08
MID1O15344 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MID1O15344 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MID1O15344 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MID1O15344 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MID1O15344 FAM86MP-201ENST00000340703 885 ntBASIC15.54■□□□□ 0.08
MID1O15344 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MID1O15344 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.54■□□□□ 0.08
MID1O15344 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MID1O15344 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.54■□□□□ 0.08
MID1O15344 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MID1O15344 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
MID1O15344 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.54■□□□□ 0.08
MID1O15344 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MID1O15344 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC15.54■□□□□ 0.08
MID1O15344 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.54■□□□□ 0.08
MID1O15344 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.54■□□□□ 0.08
MID1O15344 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MID1O15344 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.54■□□□□ 0.08
MID1O15344 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC15.54■□□□□ 0.08
MID1O15344 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.54■□□□□ 0.08
MID1O15344 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
MID1O15344 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MID1O15344 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MID1O15344 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MID1O15344 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MID1O15344 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MID1O15344 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MID1O15344 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.54■□□□□ 0.08
MID1O15344 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MID1O15344 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MID1O15344 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MID1O15344 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.54■□□□□ 0.08
MID1O15344 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
MID1O15344 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.54■□□□□ 0.08
MID1O15344 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
MID1O15344 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
MID1O15344 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MID1O15344 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.53■□□□□ 0.08
MID1O15344 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms