Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
SLC28A1O00337 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
SLC28A1O00337 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC28A1O00337 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC28A1O00337 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC28A1O00337 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.03■□□□□ -0
SLC28A1O00337 AC007292.2-201ENST00000593524 1812 ntBASIC15.03■□□□□ -0
SLC28A1O00337 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
SLC28A1O00337 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.03■□□□□ -0
SLC28A1O00337 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC28A1O00337 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC28A1O00337 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.03■□□□□ -0
SLC28A1O00337 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.03■□□□□ -0
SLC28A1O00337 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.03■□□□□ -0
SLC28A1O00337 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
SLC28A1O00337 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.03■□□□□ -0
SLC28A1O00337 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
SLC28A1O00337 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
SLC28A1O00337 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.03■□□□□ -0
SLC28A1O00337 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SLC28A1O00337 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.03■□□□□ -0
SLC28A1O00337 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.03■□□□□ -0
SLC28A1O00337 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.03■□□□□ -0
SLC28A1O00337 SPDYE7P-202ENST00000420373 878 ntBASIC15.03■□□□□ -0
SLC28A1O00337 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.03■□□□□ -0
SLC28A1O00337 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.03■□□□□ -0
SLC28A1O00337 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.03■□□□□ -0
SLC28A1O00337 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.03■□□□□ -0
SLC28A1O00337 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.03■□□□□ -0
SLC28A1O00337 AL079307.3-201ENST00000556114 283 ntBASIC15.03■□□□□ -0
SLC28A1O00337 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
SLC28A1O00337 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC28A1O00337 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.03■□□□□ -0
SLC28A1O00337 MIR4453-201ENST00000584019 89 ntBASIC15.03■□□□□ -0
SLC28A1O00337 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.03■□□□□ -0
SLC28A1O00337 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.03■□□□□ -0
SLC28A1O00337 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC28A1O00337 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
SLC28A1O00337 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.03■□□□□ -0
SLC28A1O00337 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC28A1O00337 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.03■□□□□ -0
SLC28A1O00337 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
SLC28A1O00337 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
SLC28A1O00337 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.03■□□□□ -0
SLC28A1O00337 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.03■□□□□ -0
SLC28A1O00337 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.03■□□□□ -0
SLC28A1O00337 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC28A1O00337 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.03■□□□□ -0
SLC28A1O00337 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC28A1O00337 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC28A1O00337 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SLC28A1O00337 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
SLC28A1O00337 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.03■□□□□ -0
SLC28A1O00337 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
SLC28A1O00337 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.02■□□□□ -0
SLC28A1O00337 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.02■□□□□ -0
SLC28A1O00337 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
SLC28A1O00337 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SLC28A1O00337 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
SLC28A1O00337 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SLC28A1O00337 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.02■□□□□ -0
SLC28A1O00337 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
SLC28A1O00337 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
SLC28A1O00337 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.02■□□□□ -0
SLC28A1O00337 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.02■□□□□ -0
SLC28A1O00337 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.02■□□□□ -0
SLC28A1O00337 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SLC28A1O00337 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.02■□□□□ -0
SLC28A1O00337 AL365209.1-201ENST00000624418 6473 ntBASIC15.02■□□□□ -0
SLC28A1O00337 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SLC28A1O00337 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.02■□□□□ -0
SLC28A1O00337 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.02■□□□□ -0
SLC28A1O00337 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SLC28A1O00337 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
SLC28A1O00337 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.02■□□□□ -0
SLC28A1O00337 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
SLC28A1O00337 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.02■□□□□ -0
SLC28A1O00337 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.02■□□□□ -0
SLC28A1O00337 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.02■□□□□ -0
SLC28A1O00337 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.02■□□□□ -0
SLC28A1O00337 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.02■□□□□ -0
SLC28A1O00337 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.02■□□□□ -0
SLC28A1O00337 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.02■□□□□ -0
SLC28A1O00337 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.02■□□□□ -0
SLC28A1O00337 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.02■□□□□ -0
SLC28A1O00337 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.02■□□□□ -0
SLC28A1O00337 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.02■□□□□ -0
SLC28A1O00337 MIR6080-201ENST00000617359 66 ntBASIC15.02■□□□□ -0
SLC28A1O00337 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
SLC28A1O00337 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
SLC28A1O00337 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SLC28A1O00337 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SLC28A1O00337 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SLC28A1O00337 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
SLC28A1O00337 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
SLC28A1O00337 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
SLC28A1O00337 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.02□□□□□ -0.01
SLC28A1O00337 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.02□□□□□ -0.01
SLC28A1O00337 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.02□□□□□ -0.01
SLC28A1O00337 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms