Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.77■□□□□ 0.12
AP3B1O00203 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.77■□□□□ 0.12
AP3B1O00203 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.77■□□□□ 0.12
AP3B1O00203 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.77■□□□□ 0.12
AP3B1O00203 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.77■□□□□ 0.12
AP3B1O00203 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
AP3B1O00203 AC027612.4-201ENST00000605371 583 ntBASIC15.77■□□□□ 0.12
AP3B1O00203 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.77■□□□□ 0.12
AP3B1O00203 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
AP3B1O00203 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
AP3B1O00203 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
AP3B1O00203 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
AP3B1O00203 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.77■□□□□ 0.11
AP3B1O00203 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
AP3B1O00203 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
AP3B1O00203 AC007326.2-201ENST00000624224 7579 ntBASIC15.77■□□□□ 0.11
AP3B1O00203 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
AP3B1O00203 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
AP3B1O00203 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
AP3B1O00203 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.77■□□□□ 0.11
AP3B1O00203 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
AP3B1O00203 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
AP3B1O00203 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
AP3B1O00203 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
AP3B1O00203 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.77■□□□□ 0.11
AP3B1O00203 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
AP3B1O00203 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.11
AP3B1O00203 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
AP3B1O00203 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
AP3B1O00203 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP3B1O00203 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.76■□□□□ 0.11
AP3B1O00203 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP3B1O00203 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP3B1O00203 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP3B1O00203 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.76■□□□□ 0.11
AP3B1O00203 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
AP3B1O00203 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP3B1O00203 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
AP3B1O00203 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP3B1O00203 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
AP3B1O00203 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP3B1O00203 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.76■□□□□ 0.11
AP3B1O00203 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP3B1O00203 TUBB3P1-201ENST00000405796 1332 ntBASIC15.76■□□□□ 0.11
AP3B1O00203 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
AP3B1O00203 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
AP3B1O00203 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP3B1O00203 TSEN15P1-201ENST00000423257 515 ntBASIC15.76■□□□□ 0.11
AP3B1O00203 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.76■□□□□ 0.11
AP3B1O00203 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.76■□□□□ 0.11
AP3B1O00203 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.76■□□□□ 0.11
AP3B1O00203 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.76■□□□□ 0.11
AP3B1O00203 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
AP3B1O00203 KRT18P43-201ENST00000469825 1281 ntBASIC15.76■□□□□ 0.11
AP3B1O00203 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.76■□□□□ 0.11
AP3B1O00203 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
AP3B1O00203 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.76■□□□□ 0.11
AP3B1O00203 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.76■□□□□ 0.11
AP3B1O00203 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
AP3B1O00203 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
AP3B1O00203 TEX28P1-201ENST00000613479 1221 ntBASIC15.76■□□□□ 0.11
AP3B1O00203 TEX28P2-201ENST00000617764 1221 ntBASIC15.76■□□□□ 0.11
AP3B1O00203 AC073592.8-201ENST00000624126 511 ntBASIC15.76■□□□□ 0.11
AP3B1O00203 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.76■□□□□ 0.11
AP3B1O00203 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
AP3B1O00203 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.76■□□□□ 0.11
AP3B1O00203 TNRC18P2-201ENST00000417666 2714 ntBASIC15.76■□□□□ 0.11
AP3B1O00203 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP3B1O00203 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
AP3B1O00203 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
AP3B1O00203 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP3B1O00203 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP3B1O00203 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
AP3B1O00203 AC138969.3-201ENST00000546612 1459 ntBASIC15.76■□□□□ 0.11
AP3B1O00203 AC138932.2-201ENST00000548268 1459 ntBASIC15.76■□□□□ 0.11
AP3B1O00203 AC126755.4-201ENST00000549796 1459 ntBASIC15.76■□□□□ 0.11
AP3B1O00203 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
AP3B1O00203 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP3B1O00203 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP3B1O00203 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
AP3B1O00203 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.76■□□□□ 0.11
AP3B1O00203 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP3B1O00203 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
AP3B1O00203 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP3B1O00203 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
AP3B1O00203 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP3B1O00203 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP3B1O00203 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.75■□□□□ 0.11
AP3B1O00203 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
AP3B1O00203 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP3B1O00203 AC097376.2-205ENST00000610159 5334 ntBASIC15.75■□□□□ 0.11
AP3B1O00203 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
AP3B1O00203 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
AP3B1O00203 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.75■□□□□ 0.11
AP3B1O00203 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
AP3B1O00203 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.75■□□□□ 0.11
AP3B1O00203 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
AP3B1O00203 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.75■□□□□ 0.11
AP3B1O00203 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
AP3B1O00203 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms