Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
USP17L11C9JVI0 AP005117.1-202ENST00000581724 1908 ntBASIC17.96■□□□□ 0.47
USP17L11C9JVI0 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.96■□□□□ 0.47
USP17L11C9JVI0 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
USP17L11C9JVI0 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP17L11C9JVI0 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
USP17L11C9JVI0 MIR326-201ENST00000362220 95 ntBASIC17.96■□□□□ 0.47
USP17L11C9JVI0 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
USP17L11C9JVI0 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP17L11C9JVI0 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
USP17L11C9JVI0 MIR1247-201ENST00000408206 136 ntBASIC17.96■□□□□ 0.47
USP17L11C9JVI0 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.96■□□□□ 0.47
USP17L11C9JVI0 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.96■□□□□ 0.47
USP17L11C9JVI0 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
USP17L11C9JVI0 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.96■□□□□ 0.47
USP17L11C9JVI0 MIR3615-201ENST00000581999 87 ntBASIC17.96■□□□□ 0.47
USP17L11C9JVI0 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC17.96■□□□□ 0.47
USP17L11C9JVI0 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.96■□□□□ 0.47
USP17L11C9JVI0 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.96■□□□□ 0.47
USP17L11C9JVI0 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
USP17L11C9JVI0 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP17L11C9JVI0 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP17L11C9JVI0 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP17L11C9JVI0 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
USP17L11C9JVI0 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
USP17L11C9JVI0 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
USP17L11C9JVI0 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.96■□□□□ 0.47
USP17L11C9JVI0 AHCYP2-201ENST00000430630 1300 ntBASIC17.96■□□□□ 0.46
USP17L11C9JVI0 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.96■□□□□ 0.46
USP17L11C9JVI0 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
USP17L11C9JVI0 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.96■□□□□ 0.46
USP17L11C9JVI0 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP17L11C9JVI0 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP17L11C9JVI0 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP17L11C9JVI0 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP17L11C9JVI0 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.95■□□□□ 0.46
USP17L11C9JVI0 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP17L11C9JVI0 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.95■□□□□ 0.46
USP17L11C9JVI0 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
USP17L11C9JVI0 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
USP17L11C9JVI0 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
USP17L11C9JVI0 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP17L11C9JVI0 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
USP17L11C9JVI0 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP17L11C9JVI0 TNRC18P3-201ENST00000441896 2691 ntBASIC17.95■□□□□ 0.46
USP17L11C9JVI0 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC17.95■□□□□ 0.46
USP17L11C9JVI0 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC17.95■□□□□ 0.46
USP17L11C9JVI0 GPAA1P2-201ENST00000417923 928 ntBASIC17.95■□□□□ 0.46
USP17L11C9JVI0 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
USP17L11C9JVI0 RNA5SP486-201ENST00000515961 83 ntBASIC17.95■□□□□ 0.46
USP17L11C9JVI0 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
USP17L11C9JVI0 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC17.95■□□□□ 0.46
USP17L11C9JVI0 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC17.95■□□□□ 0.46
USP17L11C9JVI0 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
USP17L11C9JVI0 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
USP17L11C9JVI0 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC17.95■□□□□ 0.46
USP17L11C9JVI0 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC17.95■□□□□ 0.46
USP17L11C9JVI0 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC17.95■□□□□ 0.46
USP17L11C9JVI0 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC17.95■□□□□ 0.46
USP17L11C9JVI0 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
USP17L11C9JVI0 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP17L11C9JVI0 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP17L11C9JVI0 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP17L11C9JVI0 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP17L11C9JVI0 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP17L11C9JVI0 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
USP17L11C9JVI0 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.94■□□□□ 0.46
USP17L11C9JVI0 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
USP17L11C9JVI0 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
USP17L11C9JVI0 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
USP17L11C9JVI0 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
USP17L11C9JVI0 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.94■□□□□ 0.46
USP17L11C9JVI0 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
USP17L11C9JVI0 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
USP17L11C9JVI0 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
USP17L11C9JVI0 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
USP17L11C9JVI0 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
USP17L11C9JVI0 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
USP17L11C9JVI0 AC245100.3-201ENST00000441281 285 ntBASIC17.94■□□□□ 0.46
USP17L11C9JVI0 GOLGA2P4-201ENST00000441462 777 ntBASIC17.94■□□□□ 0.46
USP17L11C9JVI0 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
USP17L11C9JVI0 PFN2-215ENST00000497148 743 ntTSL 4 BASIC17.94■□□□□ 0.46
USP17L11C9JVI0 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
USP17L11C9JVI0 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC17.94■□□□□ 0.46
USP17L11C9JVI0 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC17.94■□□□□ 0.46
USP17L11C9JVI0 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC17.94■□□□□ 0.46
USP17L11C9JVI0 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC17.94■□□□□ 0.46
USP17L11C9JVI0 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.94■□□□□ 0.46
USP17L11C9JVI0 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC17.94■□□□□ 0.46
USP17L11C9JVI0 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.94■□□□□ 0.46
USP17L11C9JVI0 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
USP17L11C9JVI0 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.94■□□□□ 0.46
USP17L11C9JVI0 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
USP17L11C9JVI0 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
USP17L11C9JVI0 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
USP17L11C9JVI0 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
USP17L11C9JVI0 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
USP17L11C9JVI0 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
USP17L11C9JVI0 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
USP17L11C9JVI0 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms