Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM6-TRIM34B2RNG4 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM6-TRIM34B2RNG4 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
TRIM6-TRIM34B2RNG4 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM6-TRIM34B2RNG4 PCDHA3-202ENST00000532566 4594 ntBASIC19.1■□□□□ 0.65
TRIM6-TRIM34B2RNG4 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
TRIM6-TRIM34B2RNG4 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
TRIM6-TRIM34B2RNG4 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC19.1■□□□□ 0.65
TRIM6-TRIM34B2RNG4 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC19.1■□□□□ 0.65
TRIM6-TRIM34B2RNG4 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM6-TRIM34B2RNG4 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC19.1■□□□□ 0.65
TRIM6-TRIM34B2RNG4 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC19.1■□□□□ 0.65
TRIM6-TRIM34B2RNG4 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC19.1■□□□□ 0.65
TRIM6-TRIM34B2RNG4 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM6-TRIM34B2RNG4 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC19.1■□□□□ 0.65
TRIM6-TRIM34B2RNG4 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM6-TRIM34B2RNG4 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM6-TRIM34B2RNG4 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
TRIM6-TRIM34B2RNG4 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM6-TRIM34B2RNG4 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM6-TRIM34B2RNG4 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM6-TRIM34B2RNG4 AMT-224ENST00000635808 1610 ntTSL 5 BASIC19.1■□□□□ 0.65
TRIM6-TRIM34B2RNG4 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM6-TRIM34B2RNG4 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM6-TRIM34B2RNG4 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM6-TRIM34B2RNG4 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
TRIM6-TRIM34B2RNG4 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM6-TRIM34B2RNG4 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM6-TRIM34B2RNG4 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM6-TRIM34B2RNG4 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM6-TRIM34B2RNG4 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM6-TRIM34B2RNG4 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM6-TRIM34B2RNG4 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM6-TRIM34B2RNG4 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
TRIM6-TRIM34B2RNG4 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM6-TRIM34B2RNG4 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
TRIM6-TRIM34B2RNG4 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM6-TRIM34B2RNG4 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM6-TRIM34B2RNG4 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM6-TRIM34B2RNG4 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC19.09■□□□□ 0.65
TRIM6-TRIM34B2RNG4 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC19.09■□□□□ 0.65
TRIM6-TRIM34B2RNG4 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM6-TRIM34B2RNG4 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM6-TRIM34B2RNG4 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC19.09■□□□□ 0.65
TRIM6-TRIM34B2RNG4 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC19.09■□□□□ 0.65
TRIM6-TRIM34B2RNG4 TSSK5P-201ENST00000423978 907 ntBASIC19.09■□□□□ 0.65
TRIM6-TRIM34B2RNG4 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
TRIM6-TRIM34B2RNG4 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC19.09■□□□□ 0.65
TRIM6-TRIM34B2RNG4 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC19.09■□□□□ 0.65
TRIM6-TRIM34B2RNG4 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC19.09■□□□□ 0.65
TRIM6-TRIM34B2RNG4 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC19.09■□□□□ 0.65
TRIM6-TRIM34B2RNG4 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM6-TRIM34B2RNG4 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM6-TRIM34B2RNG4 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM6-TRIM34B2RNG4 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM6-TRIM34B2RNG4 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM6-TRIM34B2RNG4 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
TRIM6-TRIM34B2RNG4 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM6-TRIM34B2RNG4 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC19.09■□□□□ 0.65
TRIM6-TRIM34B2RNG4 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM6-TRIM34B2RNG4 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM6-TRIM34B2RNG4 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM6-TRIM34B2RNG4 DEK-201ENST00000244776 1441 ntTSL 2 BASIC19.08■□□□□ 0.65
TRIM6-TRIM34B2RNG4 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TRIM6-TRIM34B2RNG4 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC19.08■□□□□ 0.65
TRIM6-TRIM34B2RNG4 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRIM6-TRIM34B2RNG4 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TRIM6-TRIM34B2RNG4 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
TRIM6-TRIM34B2RNG4 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRIM6-TRIM34B2RNG4 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRIM6-TRIM34B2RNG4 MIR600HG-201ENST00000449175 5984 ntBASIC19.08■□□□□ 0.65
TRIM6-TRIM34B2RNG4 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRIM6-TRIM34B2RNG4 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM6-TRIM34B2RNG4 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
TRIM6-TRIM34B2RNG4 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
TRIM6-TRIM34B2RNG4 NME2-201ENST00000393183 568 ntTSL 2 BASIC19.08■□□□□ 0.64
TRIM6-TRIM34B2RNG4 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM6-TRIM34B2RNG4 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM6-TRIM34B2RNG4 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC19.08■□□□□ 0.64
TRIM6-TRIM34B2RNG4 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC19.08■□□□□ 0.64
TRIM6-TRIM34B2RNG4 AC015922.1-201ENST00000421102 1152 ntBASIC19.08■□□□□ 0.64
TRIM6-TRIM34B2RNG4 RPL13P2-201ENST00000440687 659 ntBASIC19.08■□□□□ 0.64
TRIM6-TRIM34B2RNG4 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC19.08■□□□□ 0.64
TRIM6-TRIM34B2RNG4 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC19.08■□□□□ 0.64
TRIM6-TRIM34B2RNG4 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC19.08■□□□□ 0.64
TRIM6-TRIM34B2RNG4 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC19.08■□□□□ 0.64
TRIM6-TRIM34B2RNG4 AC027796.2-201ENST00000575326 344 ntBASIC19.08■□□□□ 0.64
TRIM6-TRIM34B2RNG4 SSH2-210ENST00000582084 560 ntTSL 3 BASIC19.08■□□□□ 0.64
TRIM6-TRIM34B2RNG4 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC19.08■□□□□ 0.64
TRIM6-TRIM34B2RNG4 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC19.08■□□□□ 0.64
TRIM6-TRIM34B2RNG4 AL390955.2-201ENST00000603032 514 ntBASIC19.08■□□□□ 0.64
TRIM6-TRIM34B2RNG4 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC19.08■□□□□ 0.64
TRIM6-TRIM34B2RNG4 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC19.08■□□□□ 0.64
TRIM6-TRIM34B2RNG4 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
TRIM6-TRIM34B2RNG4 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
TRIM6-TRIM34B2RNG4 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM6-TRIM34B2RNG4 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM6-TRIM34B2RNG4 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
TRIM6-TRIM34B2RNG4 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC19.08■□□□□ 0.64
TRIM6-TRIM34B2RNG4 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms