Protein–RNA interactions for Protein: A8MV65

VGLL3, Transcription cofactor vestigial-like protein 3, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3A8MV65 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC15.32■□□□□ 0.04
VGLL3A8MV65 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC15.32■□□□□ 0.04
VGLL3A8MV65 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC15.32■□□□□ 0.04
VGLL3A8MV65 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VGLL3A8MV65 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.32■□□□□ 0.04
VGLL3A8MV65 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VGLL3A8MV65 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC15.32■□□□□ 0.04
VGLL3A8MV65 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC15.32■□□□□ 0.04
VGLL3A8MV65 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VGLL3A8MV65 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VGLL3A8MV65 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC15.32■□□□□ 0.04
VGLL3A8MV65 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
VGLL3A8MV65 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC15.32■□□□□ 0.04
VGLL3A8MV65 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
VGLL3A8MV65 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VGLL3A8MV65 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC15.32■□□□□ 0.04
VGLL3A8MV65 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
VGLL3A8MV65 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
VGLL3A8MV65 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC15.32■□□□□ 0.04
VGLL3A8MV65 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC15.32■□□□□ 0.04
VGLL3A8MV65 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VGLL3A8MV65 FAM87A-204ENST00000613235 858 ntBASIC15.32■□□□□ 0.04
VGLL3A8MV65 AC092865.7-201ENST00000641832 219 ntBASIC15.32■□□□□ 0.04
VGLL3A8MV65 MZF1-AS1-202ENST00000600534 2567 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VGLL3A8MV65 FOSB-203ENST00000443841 3346 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VGLL3A8MV65 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.32■□□□□ 0.04
VGLL3A8MV65 SHC1-210ENST00000448116 3481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VGLL3A8MV65 CICP18-201ENST00000406017 2812 ntBASIC15.32■□□□□ 0.04
VGLL3A8MV65 TSKU-203ENST00000527881 3554 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
VGLL3A8MV65 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC15.32■□□□□ 0.04
VGLL3A8MV65 DRC7-203ENST00000394337 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
VGLL3A8MV65 ST3GAL5-204ENST00000393808 2236 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VGLL3A8MV65 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
VGLL3A8MV65 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VGLL3A8MV65 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.32■□□□□ 0.04
VGLL3A8MV65 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VGLL3A8MV65 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC15.32■□□□□ 0.04
VGLL3A8MV65 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC15.32■□□□□ 0.04
VGLL3A8MV65 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VGLL3A8MV65 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
VGLL3A8MV65 IP6K3-201ENST00000293756 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VGLL3A8MV65 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VGLL3A8MV65 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VGLL3A8MV65 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VGLL3A8MV65 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
VGLL3A8MV65 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VGLL3A8MV65 EDARADD-204ENST00000637660 2803 ntTSL 5 BASIC15.31■□□□□ 0.04
VGLL3A8MV65 SLC13A4-201ENST00000354042 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VGLL3A8MV65 SLC13A2-202ENST00000444914 2855 ntTSL 2 BASIC15.31■□□□□ 0.04
VGLL3A8MV65 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VGLL3A8MV65 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC15.31■□□□□ 0.04
VGLL3A8MV65 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
VGLL3A8MV65 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.31■□□□□ 0.04
VGLL3A8MV65 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VGLL3A8MV65 AAGAB-207ENST00000561452 2251 ntTSL 5 BASIC15.31■□□□□ 0.04
VGLL3A8MV65 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VGLL3A8MV65 OS9-203ENST00000389142 2457 ntTSL 5 BASIC15.31■□□□□ 0.04
VGLL3A8MV65 AC012485.1-201ENST00000456601 2509 ntTSL 2 BASIC15.31■□□□□ 0.04
VGLL3A8MV65 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VGLL3A8MV65 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
VGLL3A8MV65 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VGLL3A8MV65 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
VGLL3A8MV65 RCN1P1-201ENST00000400413 996 ntBASIC15.31■□□□□ 0.04
VGLL3A8MV65 HMGA1P5-201ENST00000412453 271 ntBASIC15.31■□□□□ 0.04
VGLL3A8MV65 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC15.31■□□□□ 0.04
VGLL3A8MV65 AC007663.1-201ENST00000438948 1240 ntBASIC15.31■□□□□ 0.04
VGLL3A8MV65 GXYLT1P6-201ENST00000456472 1187 ntBASIC15.31■□□□□ 0.04
VGLL3A8MV65 AL512604.3-201ENST00000569583 964 ntBASIC15.31■□□□□ 0.04
VGLL3A8MV65 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VGLL3A8MV65 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
VGLL3A8MV65 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
VGLL3A8MV65 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VGLL3A8MV65 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
VGLL3A8MV65 POLL-203ENST00000370162 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VGLL3A8MV65 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.31■□□□□ 0.04
VGLL3A8MV65 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
VGLL3A8MV65 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC15.31■□□□□ 0.04
VGLL3A8MV65 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC15.31■□□□□ 0.04
VGLL3A8MV65 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VGLL3A8MV65 ROBO4-208ENST00000533054 3071 ntTSL 2 BASIC15.31■□□□□ 0.04
VGLL3A8MV65 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VGLL3A8MV65 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
VGLL3A8MV65 NTNG1-207ENST00000370073 3347 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
VGLL3A8MV65 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
VGLL3A8MV65 SDHAP2-201ENST00000455183 2001 ntBASIC15.31■□□□□ 0.04
VGLL3A8MV65 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
VGLL3A8MV65 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VGLL3A8MV65 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC15.31■□□□□ 0.04
VGLL3A8MV65 SLC44A4-203ENST00000375562 2505 ntTSL 2 BASIC15.31■□□□□ 0.04
VGLL3A8MV65 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
VGLL3A8MV65 NLRX1-214ENST00000525863 2850 ntTSL 5 BASIC15.3■□□□□ 0.04
VGLL3A8MV65 PRPH2-201ENST00000230381 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VGLL3A8MV65 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
VGLL3A8MV65 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
VGLL3A8MV65 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
VGLL3A8MV65 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
VGLL3A8MV65 EPN3-201ENST00000268933 4071 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
VGLL3A8MV65 TERF1P1-201ENST00000311003 1181 ntBASIC15.3■□□□□ 0.04
VGLL3A8MV65 ZNF140-202ENST00000355557 3550 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VGLL3A8MV65 PI4KB-204ENST00000368875 3983 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms