Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSNK1G3Q9Y6M4 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.26■□□□□ 0.03
CSNK1G3Q9Y6M4 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CSNK1G3Q9Y6M4 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CSNK1G3Q9Y6M4 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSNK1G3Q9Y6M4 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.26■□□□□ 0.03
CSNK1G3Q9Y6M4 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CSNK1G3Q9Y6M4 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSNK1G3Q9Y6M4 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSNK1G3Q9Y6M4 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CSNK1G3Q9Y6M4 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSNK1G3Q9Y6M4 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSNK1G3Q9Y6M4 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSNK1G3Q9Y6M4 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
CSNK1G3Q9Y6M4 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSNK1G3Q9Y6M4 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CSNK1G3Q9Y6M4 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSNK1G3Q9Y6M4 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CSNK1G3Q9Y6M4 ACTBP11-201ENST00000436287 1126 ntBASIC15.26■□□□□ 0.03
CSNK1G3Q9Y6M4 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.26■□□□□ 0.03
CSNK1G3Q9Y6M4 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
CSNK1G3Q9Y6M4 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC15.26■□□□□ 0.03
CSNK1G3Q9Y6M4 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.26■□□□□ 0.03
CSNK1G3Q9Y6M4 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
CSNK1G3Q9Y6M4 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.26■□□□□ 0.03
CSNK1G3Q9Y6M4 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.26■□□□□ 0.03
CSNK1G3Q9Y6M4 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.26■□□□□ 0.03
CSNK1G3Q9Y6M4 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CSNK1G3Q9Y6M4 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.26■□□□□ 0.03
CSNK1G3Q9Y6M4 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CSNK1G3Q9Y6M4 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSNK1G3Q9Y6M4 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.26■□□□□ 0.03
CSNK1G3Q9Y6M4 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CSNK1G3Q9Y6M4 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSNK1G3Q9Y6M4 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CSNK1G3Q9Y6M4 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CSNK1G3Q9Y6M4 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.26■□□□□ 0.03
CSNK1G3Q9Y6M4 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSNK1G3Q9Y6M4 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSNK1G3Q9Y6M4 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CSNK1G3Q9Y6M4 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CSNK1G3Q9Y6M4 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.26■□□□□ 0.03
CSNK1G3Q9Y6M4 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CSNK1G3Q9Y6M4 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.26■□□□□ 0.03
CSNK1G3Q9Y6M4 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.26■□□□□ 0.03
CSNK1G3Q9Y6M4 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSNK1G3Q9Y6M4 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CSNK1G3Q9Y6M4 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CSNK1G3Q9Y6M4 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.26■□□□□ 0.03
CSNK1G3Q9Y6M4 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1G3Q9Y6M4 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1G3Q9Y6M4 AC022188.1-201ENST00000620960 1664 ntBASIC15.25■□□□□ 0.03
CSNK1G3Q9Y6M4 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CSNK1G3Q9Y6M4 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1G3Q9Y6M4 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CSNK1G3Q9Y6M4 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1G3Q9Y6M4 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CSNK1G3Q9Y6M4 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1G3Q9Y6M4 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1G3Q9Y6M4 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1G3Q9Y6M4 FAM86MP-201ENST00000340703 885 ntBASIC15.25■□□□□ 0.03
CSNK1G3Q9Y6M4 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1G3Q9Y6M4 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CSNK1G3Q9Y6M4 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CSNK1G3Q9Y6M4 FTH1P14-201ENST00000482930 551 ntBASIC15.25■□□□□ 0.03
CSNK1G3Q9Y6M4 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.25■□□□□ 0.03
CSNK1G3Q9Y6M4 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.25■□□□□ 0.03
CSNK1G3Q9Y6M4 PACS1-203ENST00000524815 628 ntTSL 4 BASIC15.25■□□□□ 0.03
CSNK1G3Q9Y6M4 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.25■□□□□ 0.03
CSNK1G3Q9Y6M4 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
CSNK1G3Q9Y6M4 AC015910.1-201ENST00000579400 975 ntBASIC15.25■□□□□ 0.03
CSNK1G3Q9Y6M4 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.25■□□□□ 0.03
CSNK1G3Q9Y6M4 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1G3Q9Y6M4 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1G3Q9Y6M4 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1G3Q9Y6M4 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1G3Q9Y6M4 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1G3Q9Y6M4 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.25■□□□□ 0.03
CSNK1G3Q9Y6M4 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1G3Q9Y6M4 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1G3Q9Y6M4 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.25■□□□□ 0.03
CSNK1G3Q9Y6M4 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CSNK1G3Q9Y6M4 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.25■□□□□ 0.03
CSNK1G3Q9Y6M4 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1G3Q9Y6M4 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CSNK1G3Q9Y6M4 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1G3Q9Y6M4 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.25■□□□□ 0.03
CSNK1G3Q9Y6M4 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.25■□□□□ 0.03
CSNK1G3Q9Y6M4 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.25■□□□□ 0.03
CSNK1G3Q9Y6M4 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CSNK1G3Q9Y6M4 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.24■□□□□ 0.03
CSNK1G3Q9Y6M4 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1G3Q9Y6M4 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.24■□□□□ 0.03
CSNK1G3Q9Y6M4 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1G3Q9Y6M4 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.24■□□□□ 0.03
CSNK1G3Q9Y6M4 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1G3Q9Y6M4 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1G3Q9Y6M4 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1G3Q9Y6M4 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
CSNK1G3Q9Y6M4 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms