Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
PCDHB13Q9Y5F0 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.35■□□□□ 0.37
PCDHB13Q9Y5F0 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB13Q9Y5F0 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB13Q9Y5F0 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB13Q9Y5F0 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB13Q9Y5F0 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB13Q9Y5F0 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB13Q9Y5F0 AP002414.2-201ENST00000591780 3365 ntBASIC17.35■□□□□ 0.37
PCDHB13Q9Y5F0 AC009090.5-201ENST00000624886 2285 ntBASIC17.35■□□□□ 0.37
PCDHB13Q9Y5F0 FES-204ENST00000414248 2327 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHB13Q9Y5F0 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB13Q9Y5F0 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHB13Q9Y5F0 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
PCDHB13Q9Y5F0 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB13Q9Y5F0 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PCDHB13Q9Y5F0 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
PCDHB13Q9Y5F0 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.35■□□□□ 0.37
PCDHB13Q9Y5F0 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.35■□□□□ 0.37
PCDHB13Q9Y5F0 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.35■□□□□ 0.37
PCDHB13Q9Y5F0 RPL13P2-201ENST00000440687 659 ntBASIC17.35■□□□□ 0.37
PCDHB13Q9Y5F0 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.35■□□□□ 0.37
PCDHB13Q9Y5F0 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHB13Q9Y5F0 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB13Q9Y5F0 SLED1-202ENST00000512051 380 ntBASIC17.35■□□□□ 0.37
PCDHB13Q9Y5F0 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.35■□□□□ 0.37
PCDHB13Q9Y5F0 AC009407.1-201ENST00000568958 598 ntBASIC17.35■□□□□ 0.37
PCDHB13Q9Y5F0 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.35■□□□□ 0.37
PCDHB13Q9Y5F0 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.35■□□□□ 0.37
PCDHB13Q9Y5F0 AC110792.4-201ENST00000609843 298 ntBASIC17.35■□□□□ 0.37
PCDHB13Q9Y5F0 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHB13Q9Y5F0 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB13Q9Y5F0 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB13Q9Y5F0 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB13Q9Y5F0 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB13Q9Y5F0 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB13Q9Y5F0 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB13Q9Y5F0 AC090616.6-203ENST00000579186 1945 ntBASIC17.35■□□□□ 0.37
PCDHB13Q9Y5F0 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB13Q9Y5F0 SSR4P1-203ENST00000599569 2260 ntBASIC17.35■□□□□ 0.37
PCDHB13Q9Y5F0 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB13Q9Y5F0 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHB13Q9Y5F0 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
PCDHB13Q9Y5F0 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB13Q9Y5F0 AC092384.3-202ENST00000564646 2873 ntBASIC17.34■□□□□ 0.37
PCDHB13Q9Y5F0 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB13Q9Y5F0 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
PCDHB13Q9Y5F0 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB13Q9Y5F0 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB13Q9Y5F0 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHB13Q9Y5F0 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB13Q9Y5F0 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB13Q9Y5F0 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PCDHB13Q9Y5F0 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB13Q9Y5F0 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.34■□□□□ 0.37
PCDHB13Q9Y5F0 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
PCDHB13Q9Y5F0 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB13Q9Y5F0 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHB13Q9Y5F0 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PCDHB13Q9Y5F0 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB13Q9Y5F0 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.34■□□□□ 0.37
PCDHB13Q9Y5F0 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC17.34■□□□□ 0.37
PCDHB13Q9Y5F0 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.34■□□□□ 0.37
PCDHB13Q9Y5F0 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHB13Q9Y5F0 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHB13Q9Y5F0 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PCDHB13Q9Y5F0 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.34■□□□□ 0.37
PCDHB13Q9Y5F0 AC114501.2-201ENST00000439631 535 ntBASIC17.34■□□□□ 0.37
PCDHB13Q9Y5F0 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDHB13Q9Y5F0 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC17.34■□□□□ 0.37
PCDHB13Q9Y5F0 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB13Q9Y5F0 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PCDHB13Q9Y5F0 TIMM17BP1-201ENST00000545713 516 ntBASIC17.34■□□□□ 0.37
PCDHB13Q9Y5F0 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB13Q9Y5F0 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PCDHB13Q9Y5F0 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB13Q9Y5F0 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDHB13Q9Y5F0 5S_rRNA.22-201ENST00000614916 106 ntBASIC17.34■□□□□ 0.37
PCDHB13Q9Y5F0 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHB13Q9Y5F0 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHB13Q9Y5F0 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDHB13Q9Y5F0 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB13Q9Y5F0 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB13Q9Y5F0 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB13Q9Y5F0 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHB13Q9Y5F0 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHB13Q9Y5F0 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHB13Q9Y5F0 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHB13Q9Y5F0 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.33■□□□□ 0.37
PCDHB13Q9Y5F0 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC17.33■□□□□ 0.37
PCDHB13Q9Y5F0 AC087481.3-201ENST00000602886 1894 ntBASIC17.33■□□□□ 0.37
PCDHB13Q9Y5F0 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.33■□□□□ 0.37
PCDHB13Q9Y5F0 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.33■□□□□ 0.37
PCDHB13Q9Y5F0 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.33■□□□□ 0.37
PCDHB13Q9Y5F0 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHB13Q9Y5F0 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHB13Q9Y5F0 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
PCDHB13Q9Y5F0 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHB13Q9Y5F0 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.33■□□□□ 0.36
PCDHB13Q9Y5F0 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms