Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
AP4S1Q9Y587 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
AP4S1Q9Y587 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
AP4S1Q9Y587 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
AP4S1Q9Y587 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.79□□□□□ -0.04
AP4S1Q9Y587 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
AP4S1Q9Y587 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.79□□□□□ -0.04
AP4S1Q9Y587 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
AP4S1Q9Y587 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
AP4S1Q9Y587 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
AP4S1Q9Y587 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.79□□□□□ -0.04
AP4S1Q9Y587 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
AP4S1Q9Y587 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.79□□□□□ -0.04
AP4S1Q9Y587 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC14.79□□□□□ -0.04
AP4S1Q9Y587 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
AP4S1Q9Y587 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.79□□□□□ -0.04
AP4S1Q9Y587 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
AP4S1Q9Y587 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC14.79□□□□□ -0.04
AP4S1Q9Y587 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
AP4S1Q9Y587 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
AP4S1Q9Y587 AC113367.3-201ENST00000508316 1912 ntBASIC14.79□□□□□ -0.04
AP4S1Q9Y587 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.79□□□□□ -0.04
AP4S1Q9Y587 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
AP4S1Q9Y587 AC008608.2-201ENST00000606089 416 ntBASIC14.79□□□□□ -0.04
AP4S1Q9Y587 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.79□□□□□ -0.04
AP4S1Q9Y587 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.79□□□□□ -0.04
AP4S1Q9Y587 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
AP4S1Q9Y587 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
AP4S1Q9Y587 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
AP4S1Q9Y587 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
AP4S1Q9Y587 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AP4S1Q9Y587 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
AP4S1Q9Y587 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
AP4S1Q9Y587 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AP4S1Q9Y587 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.79□□□□□ -0.04
AP4S1Q9Y587 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP4S1Q9Y587 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP4S1Q9Y587 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
AP4S1Q9Y587 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.78□□□□□ -0.04
AP4S1Q9Y587 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP4S1Q9Y587 REXO1L2P-201ENST00000425429 2069 ntBASIC14.78□□□□□ -0.04
AP4S1Q9Y587 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP4S1Q9Y587 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
AP4S1Q9Y587 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP4S1Q9Y587 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
AP4S1Q9Y587 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
AP4S1Q9Y587 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
AP4S1Q9Y587 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.78□□□□□ -0.04
AP4S1Q9Y587 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
AP4S1Q9Y587 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
AP4S1Q9Y587 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP4S1Q9Y587 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
AP4S1Q9Y587 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP4S1Q9Y587 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP4S1Q9Y587 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.78□□□□□ -0.04
AP4S1Q9Y587 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14.78□□□□□ -0.04
AP4S1Q9Y587 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
AP4S1Q9Y587 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
AP4S1Q9Y587 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP4S1Q9Y587 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP4S1Q9Y587 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP4S1Q9Y587 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
AP4S1Q9Y587 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP4S1Q9Y587 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.78□□□□□ -0.04
AP4S1Q9Y587 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.78□□□□□ -0.04
AP4S1Q9Y587 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP4S1Q9Y587 IRF8-202ENST00000562492 946 ntTSL 3 BASIC14.78□□□□□ -0.04
AP4S1Q9Y587 AC021087.4-201ENST00000563761 564 ntBASIC14.78□□□□□ -0.04
AP4S1Q9Y587 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.78□□□□□ -0.04
AP4S1Q9Y587 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.78□□□□□ -0.04
AP4S1Q9Y587 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
AP4S1Q9Y587 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.78□□□□□ -0.04
AP4S1Q9Y587 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.78□□□□□ -0.04
AP4S1Q9Y587 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.78□□□□□ -0.04
AP4S1Q9Y587 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.78□□□□□ -0.04
AP4S1Q9Y587 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
AP4S1Q9Y587 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP4S1Q9Y587 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.78□□□□□ -0.04
AP4S1Q9Y587 MBLAC2-202ENST00000514906 1936 ntBASIC14.78□□□□□ -0.04
AP4S1Q9Y587 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP4S1Q9Y587 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP4S1Q9Y587 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP4S1Q9Y587 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.78□□□□□ -0.04
AP4S1Q9Y587 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.78□□□□□ -0.04
AP4S1Q9Y587 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.78□□□□□ -0.04
AP4S1Q9Y587 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
AP4S1Q9Y587 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP4S1Q9Y587 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
AP4S1Q9Y587 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
AP4S1Q9Y587 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
AP4S1Q9Y587 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.77□□□□□ -0.04
AP4S1Q9Y587 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
AP4S1Q9Y587 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
AP4S1Q9Y587 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
AP4S1Q9Y587 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.77□□□□□ -0.04
AP4S1Q9Y587 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
AP4S1Q9Y587 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
AP4S1Q9Y587 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
AP4S1Q9Y587 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
AP4S1Q9Y587 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms