Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC12.65□□□□□ -0.38
FOXA2Q9Y261 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC12.65□□□□□ -0.38
FOXA2Q9Y261 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
FOXA2Q9Y261 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
FOXA2Q9Y261 TUBB3P1-201ENST00000405796 1332 ntBASIC12.65□□□□□ -0.38
FOXA2Q9Y261 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC12.65□□□□□ -0.38
FOXA2Q9Y261 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FOXA2Q9Y261 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FOXA2Q9Y261 MROH4P-201ENST00000431302 1578 ntBASIC12.65□□□□□ -0.38
FOXA2Q9Y261 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
FOXA2Q9Y261 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
FOXA2Q9Y261 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FOXA2Q9Y261 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FOXA2Q9Y261 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
FOXA2Q9Y261 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FOXA2Q9Y261 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC12.65□□□□□ -0.38
FOXA2Q9Y261 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FOXA2Q9Y261 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
FOXA2Q9Y261 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
FOXA2Q9Y261 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
FOXA2Q9Y261 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FOXA2Q9Y261 KLK8-202ENST00000320838 456 ntTSL 5 BASIC12.65□□□□□ -0.38
FOXA2Q9Y261 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FOXA2Q9Y261 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
FOXA2Q9Y261 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FOXA2Q9Y261 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
FOXA2Q9Y261 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC12.65□□□□□ -0.38
FOXA2Q9Y261 RPL5P21-201ENST00000404620 815 ntBASIC12.65□□□□□ -0.38
FOXA2Q9Y261 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC12.65□□□□□ -0.38
FOXA2Q9Y261 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC12.65□□□□□ -0.38
FOXA2Q9Y261 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC12.65□□□□□ -0.38
FOXA2Q9Y261 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
FOXA2Q9Y261 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
FOXA2Q9Y261 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
FOXA2Q9Y261 KLF2P3-201ENST00000451977 1087 ntBASIC12.65□□□□□ -0.38
FOXA2Q9Y261 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC12.65□□□□□ -0.38
FOXA2Q9Y261 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC12.65□□□□□ -0.38
FOXA2Q9Y261 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC12.65□□□□□ -0.38
FOXA2Q9Y261 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FOXA2Q9Y261 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC12.65□□□□□ -0.38
FOXA2Q9Y261 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC12.65□□□□□ -0.38
FOXA2Q9Y261 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FOXA2Q9Y261 AC013726.1-201ENST00000563747 2285 ntBASIC12.65□□□□□ -0.38
FOXA2Q9Y261 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC12.65□□□□□ -0.38
FOXA2Q9Y261 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
FOXA2Q9Y261 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
FOXA2Q9Y261 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
FOXA2Q9Y261 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
FOXA2Q9Y261 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
FOXA2Q9Y261 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC12.65□□□□□ -0.38
FOXA2Q9Y261 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
FOXA2Q9Y261 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.39
FOXA2Q9Y261 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
FOXA2Q9Y261 AC007292.2-201ENST00000593524 1812 ntBASIC12.65□□□□□ -0.39
FOXA2Q9Y261 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
FOXA2Q9Y261 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
FOXA2Q9Y261 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
FOXA2Q9Y261 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
FOXA2Q9Y261 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
FOXA2Q9Y261 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
FOXA2Q9Y261 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
FOXA2Q9Y261 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
FOXA2Q9Y261 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC12.64□□□□□ -0.39
FOXA2Q9Y261 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC12.64□□□□□ -0.39
FOXA2Q9Y261 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
FOXA2Q9Y261 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
FOXA2Q9Y261 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
FOXA2Q9Y261 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
FOXA2Q9Y261 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
FOXA2Q9Y261 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
FOXA2Q9Y261 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
FOXA2Q9Y261 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC12.64□□□□□ -0.39
FOXA2Q9Y261 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
FOXA2Q9Y261 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
FOXA2Q9Y261 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
FOXA2Q9Y261 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
FOXA2Q9Y261 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
FOXA2Q9Y261 BAD-202ENST00000394531 631 ntTSL 3 BASIC12.64□□□□□ -0.39
FOXA2Q9Y261 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
FOXA2Q9Y261 AC107890.1-201ENST00000422478 521 ntBASIC12.64□□□□□ -0.39
FOXA2Q9Y261 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC12.64□□□□□ -0.39
FOXA2Q9Y261 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC12.64□□□□□ -0.39
FOXA2Q9Y261 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC12.64□□□□□ -0.39
FOXA2Q9Y261 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC12.64□□□□□ -0.39
FOXA2Q9Y261 BAD-207ENST00000544785 525 ntTSL 3 BASIC12.64□□□□□ -0.39
FOXA2Q9Y261 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC12.64□□□□□ -0.39
FOXA2Q9Y261 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC12.64□□□□□ -0.39
FOXA2Q9Y261 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
FOXA2Q9Y261 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
FOXA2Q9Y261 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
FOXA2Q9Y261 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
FOXA2Q9Y261 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
FOXA2Q9Y261 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
FOXA2Q9Y261 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
FOXA2Q9Y261 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
FOXA2Q9Y261 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
FOXA2Q9Y261 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
FOXA2Q9Y261 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC12.64□□□□□ -0.39
FOXA2Q9Y261 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC12.64□□□□□ -0.39
FOXA2Q9Y261 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms