Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.3□□□□□ -0.12
CLN6Q9NWW5 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLN6Q9NWW5 CICP14-201ENST00000629111 2732 ntBASIC14.3□□□□□ -0.12
CLN6Q9NWW5 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
CLN6Q9NWW5 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLN6Q9NWW5 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLN6Q9NWW5 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLN6Q9NWW5 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLN6Q9NWW5 INTS4P1-203ENST00000641008 3683 ntBASIC14.3□□□□□ -0.12
CLN6Q9NWW5 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CLN6Q9NWW5 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.3□□□□□ -0.12
CLN6Q9NWW5 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.3□□□□□ -0.12
CLN6Q9NWW5 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.3□□□□□ -0.12
CLN6Q9NWW5 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLN6Q9NWW5 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLN6Q9NWW5 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
CLN6Q9NWW5 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLN6Q9NWW5 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLN6Q9NWW5 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLN6Q9NWW5 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLN6Q9NWW5 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLN6Q9NWW5 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.29□□□□□ -0.12
CLN6Q9NWW5 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLN6Q9NWW5 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CLN6Q9NWW5 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLN6Q9NWW5 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLN6Q9NWW5 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLN6Q9NWW5 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLN6Q9NWW5 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLN6Q9NWW5 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLN6Q9NWW5 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLN6Q9NWW5 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLN6Q9NWW5 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLN6Q9NWW5 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLN6Q9NWW5 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLN6Q9NWW5 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLN6Q9NWW5 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLN6Q9NWW5 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLN6Q9NWW5 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CLN6Q9NWW5 AC004987.2-201ENST00000395959 1148 ntBASIC14.29□□□□□ -0.12
CLN6Q9NWW5 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.29□□□□□ -0.12
CLN6Q9NWW5 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.29□□□□□ -0.12
CLN6Q9NWW5 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.29□□□□□ -0.12
CLN6Q9NWW5 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.29□□□□□ -0.12
CLN6Q9NWW5 RHOQP3-201ENST00000437982 621 ntBASIC14.29□□□□□ -0.12
CLN6Q9NWW5 HCG4B-203ENST00000450128 991 ntBASIC14.29□□□□□ -0.12
CLN6Q9NWW5 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.29□□□□□ -0.12
CLN6Q9NWW5 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.29□□□□□ -0.12
CLN6Q9NWW5 AC096734.2-201ENST00000562054 433 ntBASIC14.29□□□□□ -0.12
CLN6Q9NWW5 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.29□□□□□ -0.12
CLN6Q9NWW5 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.29□□□□□ -0.12
CLN6Q9NWW5 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
CLN6Q9NWW5 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLN6Q9NWW5 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLN6Q9NWW5 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLN6Q9NWW5 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.29□□□□□ -0.12
CLN6Q9NWW5 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLN6Q9NWW5 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.29□□□□□ -0.12
CLN6Q9NWW5 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLN6Q9NWW5 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLN6Q9NWW5 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.29□□□□□ -0.12
CLN6Q9NWW5 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLN6Q9NWW5 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.29□□□□□ -0.12
CLN6Q9NWW5 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLN6Q9NWW5 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLN6Q9NWW5 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLN6Q9NWW5 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLN6Q9NWW5 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CLN6Q9NWW5 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLN6Q9NWW5 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLN6Q9NWW5 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.29□□□□□ -0.12
CLN6Q9NWW5 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLN6Q9NWW5 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.29□□□□□ -0.12
CLN6Q9NWW5 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLN6Q9NWW5 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLN6Q9NWW5 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CLN6Q9NWW5 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLN6Q9NWW5 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CLN6Q9NWW5 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLN6Q9NWW5 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CLN6Q9NWW5 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLN6Q9NWW5 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CLN6Q9NWW5 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CLN6Q9NWW5 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLN6Q9NWW5 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLN6Q9NWW5 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLN6Q9NWW5 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLN6Q9NWW5 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLN6Q9NWW5 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.28□□□□□ -0.12
CLN6Q9NWW5 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CLN6Q9NWW5 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.28□□□□□ -0.12
CLN6Q9NWW5 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLN6Q9NWW5 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.28□□□□□ -0.12
CLN6Q9NWW5 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLN6Q9NWW5 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.28□□□□□ -0.12
CLN6Q9NWW5 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.28□□□□□ -0.12
CLN6Q9NWW5 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.28□□□□□ -0.12
CLN6Q9NWW5 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.28□□□□□ -0.12
CLN6Q9NWW5 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.28□□□□□ -0.12
CLN6Q9NWW5 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms