Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC16.15■□□□□ 0.18
HPS4Q9NQG7 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.15■□□□□ 0.18
HPS4Q9NQG7 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
HPS4Q9NQG7 AL355864.2-201ENST00000447420 863 ntBASIC16.15■□□□□ 0.18
HPS4Q9NQG7 AC093433.1-201ENST00000458048 571 ntBASIC16.15■□□□□ 0.18
HPS4Q9NQG7 KRT18P43-201ENST00000469825 1281 ntBASIC16.15■□□□□ 0.18
HPS4Q9NQG7 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16.15■□□□□ 0.18
HPS4Q9NQG7 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.15■□□□□ 0.18
HPS4Q9NQG7 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.15■□□□□ 0.18
HPS4Q9NQG7 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.15■□□□□ 0.18
HPS4Q9NQG7 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC16.15■□□□□ 0.18
HPS4Q9NQG7 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.15■□□□□ 0.18
HPS4Q9NQG7 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.15■□□□□ 0.18
HPS4Q9NQG7 NOP2-211ENST00000540228 668 ntTSL 2 BASIC16.15■□□□□ 0.18
HPS4Q9NQG7 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC16.15■□□□□ 0.18
HPS4Q9NQG7 AC009486.1-201ENST00000569860 813 ntBASIC16.15■□□□□ 0.18
HPS4Q9NQG7 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.15■□□□□ 0.18
HPS4Q9NQG7 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.15■□□□□ 0.18
HPS4Q9NQG7 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
HPS4Q9NQG7 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.15■□□□□ 0.18
HPS4Q9NQG7 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
HPS4Q9NQG7 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HPS4Q9NQG7 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HPS4Q9NQG7 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HPS4Q9NQG7 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.15■□□□□ 0.18
HPS4Q9NQG7 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
HPS4Q9NQG7 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
HPS4Q9NQG7 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HPS4Q9NQG7 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
HPS4Q9NQG7 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
HPS4Q9NQG7 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
HPS4Q9NQG7 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
HPS4Q9NQG7 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HPS4Q9NQG7 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HPS4Q9NQG7 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.14■□□□□ 0.17
HPS4Q9NQG7 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
HPS4Q9NQG7 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.14■□□□□ 0.17
HPS4Q9NQG7 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HPS4Q9NQG7 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
HPS4Q9NQG7 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HPS4Q9NQG7 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
HPS4Q9NQG7 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HPS4Q9NQG7 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HPS4Q9NQG7 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.14■□□□□ 0.17
HPS4Q9NQG7 AC012441.1-201ENST00000446669 685 ntBASIC16.14■□□□□ 0.17
HPS4Q9NQG7 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC16.14■□□□□ 0.17
HPS4Q9NQG7 FO681548.1-201ENST00000455617 1132 ntBASIC16.14■□□□□ 0.17
HPS4Q9NQG7 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HPS4Q9NQG7 AC007551.1-201ENST00000457394 519 ntBASIC16.14■□□□□ 0.17
HPS4Q9NQG7 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HPS4Q9NQG7 FTH1P14-201ENST00000482930 551 ntBASIC16.14■□□□□ 0.17
HPS4Q9NQG7 AC106760.1-201ENST00000508690 800 ntBASIC16.14■□□□□ 0.17
HPS4Q9NQG7 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.14■□□□□ 0.17
HPS4Q9NQG7 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC16.14■□□□□ 0.17
HPS4Q9NQG7 AP000812.2-201ENST00000538934 718 ntBASIC16.14■□□□□ 0.17
HPS4Q9NQG7 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC16.14■□□□□ 0.17
HPS4Q9NQG7 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
HPS4Q9NQG7 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.14■□□□□ 0.17
HPS4Q9NQG7 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.14■□□□□ 0.17
HPS4Q9NQG7 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HPS4Q9NQG7 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
HPS4Q9NQG7 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HPS4Q9NQG7 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HPS4Q9NQG7 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
HPS4Q9NQG7 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HPS4Q9NQG7 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
HPS4Q9NQG7 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HPS4Q9NQG7 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HPS4Q9NQG7 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
HPS4Q9NQG7 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
HPS4Q9NQG7 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.14■□□□□ 0.17
HPS4Q9NQG7 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HPS4Q9NQG7 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.13■□□□□ 0.17
HPS4Q9NQG7 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HPS4Q9NQG7 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
HPS4Q9NQG7 TSPY26P-202ENST00000565928 3884 ntBASIC16.13■□□□□ 0.17
HPS4Q9NQG7 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
HPS4Q9NQG7 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HPS4Q9NQG7 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HPS4Q9NQG7 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.13■□□□□ 0.17
HPS4Q9NQG7 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HPS4Q9NQG7 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HPS4Q9NQG7 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HPS4Q9NQG7 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.13■□□□□ 0.17
HPS4Q9NQG7 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
HPS4Q9NQG7 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.13■□□□□ 0.17
HPS4Q9NQG7 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HPS4Q9NQG7 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC16.13■□□□□ 0.17
HPS4Q9NQG7 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC16.13■□□□□ 0.17
HPS4Q9NQG7 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.13■□□□□ 0.17
HPS4Q9NQG7 AP001063.1-201ENST00000568332 529 ntBASIC16.13■□□□□ 0.17
HPS4Q9NQG7 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.13■□□□□ 0.17
HPS4Q9NQG7 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.13■□□□□ 0.17
HPS4Q9NQG7 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.13■□□□□ 0.17
HPS4Q9NQG7 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.13■□□□□ 0.17
HPS4Q9NQG7 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HPS4Q9NQG7 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.13■□□□□ 0.17
HPS4Q9NQG7 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HPS4Q9NQG7 AC134312.5-201ENST00000568031 1313 ntBASIC16.13■□□□□ 0.17
HPS4Q9NQG7 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms