Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
C12orf4Q9NQ89 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
C12orf4Q9NQ89 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.69□□□□□ -0.22
C12orf4Q9NQ89 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
C12orf4Q9NQ89 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
C12orf4Q9NQ89 AP002414.3-201ENST00000589352 1468 ntBASIC13.69□□□□□ -0.22
C12orf4Q9NQ89 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
C12orf4Q9NQ89 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.69□□□□□ -0.22
C12orf4Q9NQ89 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
C12orf4Q9NQ89 HMGA1P7-201ENST00000406908 502 ntBASIC13.69□□□□□ -0.22
C12orf4Q9NQ89 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
C12orf4Q9NQ89 AF186996.4-201ENST00000467186 377 ntBASIC13.69□□□□□ -0.22
C12orf4Q9NQ89 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC13.69□□□□□ -0.22
C12orf4Q9NQ89 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC13.69□□□□□ -0.22
C12orf4Q9NQ89 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC13.69□□□□□ -0.22
C12orf4Q9NQ89 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
C12orf4Q9NQ89 AC004790.2-201ENST00000623588 572 ntBASIC13.69□□□□□ -0.22
C12orf4Q9NQ89 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.69□□□□□ -0.22
C12orf4Q9NQ89 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
C12orf4Q9NQ89 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
C12orf4Q9NQ89 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
C12orf4Q9NQ89 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
C12orf4Q9NQ89 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
C12orf4Q9NQ89 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
C12orf4Q9NQ89 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
C12orf4Q9NQ89 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
C12orf4Q9NQ89 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
C12orf4Q9NQ89 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
C12orf4Q9NQ89 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
C12orf4Q9NQ89 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
C12orf4Q9NQ89 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
C12orf4Q9NQ89 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.69□□□□□ -0.22
C12orf4Q9NQ89 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
C12orf4Q9NQ89 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
C12orf4Q9NQ89 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
C12orf4Q9NQ89 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.69□□□□□ -0.22
C12orf4Q9NQ89 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
C12orf4Q9NQ89 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.68□□□□□ -0.22
C12orf4Q9NQ89 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C12orf4Q9NQ89 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C12orf4Q9NQ89 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.68□□□□□ -0.22
C12orf4Q9NQ89 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
C12orf4Q9NQ89 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.68□□□□□ -0.22
C12orf4Q9NQ89 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.68□□□□□ -0.22
C12orf4Q9NQ89 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
C12orf4Q9NQ89 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
C12orf4Q9NQ89 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C12orf4Q9NQ89 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C12orf4Q9NQ89 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.68□□□□□ -0.22
C12orf4Q9NQ89 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
C12orf4Q9NQ89 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
C12orf4Q9NQ89 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C12orf4Q9NQ89 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C12orf4Q9NQ89 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
C12orf4Q9NQ89 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C12orf4Q9NQ89 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC13.68□□□□□ -0.22
C12orf4Q9NQ89 SLC4A1APP2-201ENST00000424054 1259 ntBASIC13.68□□□□□ -0.22
C12orf4Q9NQ89 PRSS29P-201ENST00000440800 595 ntBASIC13.68□□□□□ -0.22
C12orf4Q9NQ89 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC13.68□□□□□ -0.22
C12orf4Q9NQ89 AL513480.1-201ENST00000451731 511 ntBASIC13.68□□□□□ -0.22
C12orf4Q9NQ89 AC245100.5-201ENST00000452108 331 ntBASIC13.68□□□□□ -0.22
C12orf4Q9NQ89 AC018712.1-201ENST00000455767 687 ntBASIC13.68□□□□□ -0.22
C12orf4Q9NQ89 MOK-208ENST00000519058 917 ntTSL 2 BASIC13.68□□□□□ -0.22
C12orf4Q9NQ89 AP002469.2-201ENST00000531724 424 ntBASIC13.68□□□□□ -0.22
C12orf4Q9NQ89 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC13.68□□□□□ -0.22
C12orf4Q9NQ89 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
C12orf4Q9NQ89 MIR4751-201ENST00000578027 74 ntBASIC13.68□□□□□ -0.22
C12orf4Q9NQ89 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
C12orf4Q9NQ89 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
C12orf4Q9NQ89 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
C12orf4Q9NQ89 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C12orf4Q9NQ89 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
C12orf4Q9NQ89 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
C12orf4Q9NQ89 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
C12orf4Q9NQ89 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.68□□□□□ -0.22
C12orf4Q9NQ89 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
C12orf4Q9NQ89 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C12orf4Q9NQ89 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
C12orf4Q9NQ89 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
C12orf4Q9NQ89 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
C12orf4Q9NQ89 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C12orf4Q9NQ89 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
C12orf4Q9NQ89 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.68□□□□□ -0.22
C12orf4Q9NQ89 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
C12orf4Q9NQ89 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C12orf4Q9NQ89 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
C12orf4Q9NQ89 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.68□□□□□ -0.22
C12orf4Q9NQ89 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
C12orf4Q9NQ89 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC13.68□□□□□ -0.22
C12orf4Q9NQ89 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
C12orf4Q9NQ89 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C12orf4Q9NQ89 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
C12orf4Q9NQ89 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
C12orf4Q9NQ89 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms