Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.48■□□□□ 0.23
CD248Q9HCU0 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CD248Q9HCU0 SPDYE17-201ENST00000412399 783 ntBASIC16.48■□□□□ 0.23
CD248Q9HCU0 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC16.48■□□□□ 0.23
CD248Q9HCU0 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.48■□□□□ 0.23
CD248Q9HCU0 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.48■□□□□ 0.23
CD248Q9HCU0 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.48■□□□□ 0.23
CD248Q9HCU0 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.48■□□□□ 0.23
CD248Q9HCU0 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.48■□□□□ 0.23
CD248Q9HCU0 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
CD248Q9HCU0 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.48■□□□□ 0.23
CD248Q9HCU0 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.48■□□□□ 0.23
CD248Q9HCU0 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CD248Q9HCU0 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CD248Q9HCU0 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CD248Q9HCU0 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD248Q9HCU0 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CD248Q9HCU0 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD248Q9HCU0 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.48■□□□□ 0.23
CD248Q9HCU0 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD248Q9HCU0 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CD248Q9HCU0 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.48■□□□□ 0.23
CD248Q9HCU0 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD248Q9HCU0 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CD248Q9HCU0 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
CD248Q9HCU0 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CD248Q9HCU0 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD248Q9HCU0 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD248Q9HCU0 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD248Q9HCU0 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD248Q9HCU0 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.48■□□□□ 0.23
CD248Q9HCU0 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CD248Q9HCU0 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD248Q9HCU0 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.48■□□□□ 0.23
CD248Q9HCU0 GGT4P-201ENST00000623672 1708 ntBASIC16.48■□□□□ 0.23
CD248Q9HCU0 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CD248Q9HCU0 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.47■□□□□ 0.23
CD248Q9HCU0 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD248Q9HCU0 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CD248Q9HCU0 AL031731.1-201ENST00000642131 2094 ntBASIC16.47■□□□□ 0.23
CD248Q9HCU0 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD248Q9HCU0 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16.47■□□□□ 0.23
CD248Q9HCU0 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC16.47■□□□□ 0.23
CD248Q9HCU0 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CD248Q9HCU0 AC006486.2-201ENST00000624246 2199 ntBASIC16.47■□□□□ 0.23
CD248Q9HCU0 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD248Q9HCU0 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CD248Q9HCU0 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CD248Q9HCU0 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.47■□□□□ 0.23
CD248Q9HCU0 GPAA1P2-202ENST00000606848 1787 ntBASIC16.47■□□□□ 0.23
CD248Q9HCU0 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC16.47■□□□□ 0.23
CD248Q9HCU0 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD248Q9HCU0 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD248Q9HCU0 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CD248Q9HCU0 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CD248Q9HCU0 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CD248Q9HCU0 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.47■□□□□ 0.23
CD248Q9HCU0 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CD248Q9HCU0 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC16.47■□□□□ 0.23
CD248Q9HCU0 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.47■□□□□ 0.23
CD248Q9HCU0 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.47■□□□□ 0.23
CD248Q9HCU0 AL132655.2-201ENST00000596276 594 ntBASIC16.47■□□□□ 0.23
CD248Q9HCU0 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD248Q9HCU0 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD248Q9HCU0 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD248Q9HCU0 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD248Q9HCU0 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.47■□□□□ 0.23
CD248Q9HCU0 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CD248Q9HCU0 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.47■□□□□ 0.23
CD248Q9HCU0 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD248Q9HCU0 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.47■□□□□ 0.23
CD248Q9HCU0 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD248Q9HCU0 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD248Q9HCU0 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD248Q9HCU0 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CD248Q9HCU0 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC16.47■□□□□ 0.23
CD248Q9HCU0 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD248Q9HCU0 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD248Q9HCU0 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CD248Q9HCU0 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD248Q9HCU0 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.46■□□□□ 0.23
CD248Q9HCU0 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CD248Q9HCU0 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.46■□□□□ 0.23
CD248Q9HCU0 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD248Q9HCU0 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.46■□□□□ 0.23
CD248Q9HCU0 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD248Q9HCU0 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC16.46■□□□□ 0.23
CD248Q9HCU0 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD248Q9HCU0 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD248Q9HCU0 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CD248Q9HCU0 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD248Q9HCU0 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD248Q9HCU0 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD248Q9HCU0 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC16.46■□□□□ 0.23
CD248Q9HCU0 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD248Q9HCU0 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD248Q9HCU0 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD248Q9HCU0 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD248Q9HCU0 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.46■□□□□ 0.23
CD248Q9HCU0 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms