Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 MIR4640-201ENST00000581824 90 ntBASIC14.13□□□□□ -0.15
CHD8Q9HCK8 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CHD8Q9HCK8 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CHD8Q9HCK8 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CHD8Q9HCK8 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CHD8Q9HCK8 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.13□□□□□ -0.15
CHD8Q9HCK8 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CHD8Q9HCK8 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CHD8Q9HCK8 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHD8Q9HCK8 AC012313.1-201ENST00000593393 3059 ntBASIC14.12□□□□□ -0.15
CHD8Q9HCK8 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CHD8Q9HCK8 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHD8Q9HCK8 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CHD8Q9HCK8 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC14.12□□□□□ -0.15
CHD8Q9HCK8 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CHD8Q9HCK8 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CHD8Q9HCK8 FAU-201ENST00000279259 461 ntTSL 2 BASIC14.12□□□□□ -0.15
CHD8Q9HCK8 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC14.12□□□□□ -0.15
CHD8Q9HCK8 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CHD8Q9HCK8 AL807761.2-201ENST00000422849 729 ntBASIC14.12□□□□□ -0.15
CHD8Q9HCK8 AC026470.1-201ENST00000478038 846 ntBASIC14.12□□□□□ -0.15
CHD8Q9HCK8 RPS23-204ENST00000507980 836 ntTSL 2 BASIC14.12□□□□□ -0.15
CHD8Q9HCK8 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC14.12□□□□□ -0.15
CHD8Q9HCK8 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC14.12□□□□□ -0.15
CHD8Q9HCK8 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC14.12□□□□□ -0.15
CHD8Q9HCK8 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC14.12□□□□□ -0.15
CHD8Q9HCK8 LINC01783-202ENST00000614408 828 ntBASIC14.12□□□□□ -0.15
CHD8Q9HCK8 BX284668.2-205ENST00000619677 828 ntBASIC14.12□□□□□ -0.15
CHD8Q9HCK8 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHD8Q9HCK8 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC14.12□□□□□ -0.15
CHD8Q9HCK8 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CHD8Q9HCK8 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC14.12□□□□□ -0.15
CHD8Q9HCK8 AC025183.3-201ENST00000623526 1482 ntBASIC14.12□□□□□ -0.15
CHD8Q9HCK8 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHD8Q9HCK8 SHC1P1-201ENST00000425230 1745 ntBASIC14.12□□□□□ -0.15
CHD8Q9HCK8 AP000593.2-201ENST00000542775 1433 ntBASIC14.12□□□□□ -0.15
CHD8Q9HCK8 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC14.12□□□□□ -0.15
CHD8Q9HCK8 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHD8Q9HCK8 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.12□□□□□ -0.15
CHD8Q9HCK8 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC14.12□□□□□ -0.15
CHD8Q9HCK8 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.12□□□□□ -0.15
CHD8Q9HCK8 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHD8Q9HCK8 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
CHD8Q9HCK8 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
CHD8Q9HCK8 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.12□□□□□ -0.15
CHD8Q9HCK8 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHD8Q9HCK8 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHD8Q9HCK8 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHD8Q9HCK8 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHD8Q9HCK8 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC14.12□□□□□ -0.15
CHD8Q9HCK8 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC14.12□□□□□ -0.15
CHD8Q9HCK8 AC093826.1-201ENST00000508655 993 ntBASIC14.12□□□□□ -0.15
CHD8Q9HCK8 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.12□□□□□ -0.15
CHD8Q9HCK8 AL450487.2-201ENST00000615934 407 ntBASIC14.12□□□□□ -0.15
CHD8Q9HCK8 AL512324.3-201ENST00000619383 882 ntBASIC14.12□□□□□ -0.15
CHD8Q9HCK8 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHD8Q9HCK8 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHD8Q9HCK8 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHD8Q9HCK8 LINC01144-201ENST00000626198 1710 ntBASIC14.12□□□□□ -0.15
CHD8Q9HCK8 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHD8Q9HCK8 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.12□□□□□ -0.15
CHD8Q9HCK8 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHD8Q9HCK8 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.12□□□□□ -0.15
CHD8Q9HCK8 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC14.11□□□□□ -0.15
CHD8Q9HCK8 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHD8Q9HCK8 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CHD8Q9HCK8 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHD8Q9HCK8 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CHD8Q9HCK8 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
CHD8Q9HCK8 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC14.11□□□□□ -0.15
CHD8Q9HCK8 RN7SL494P-201ENST00000461517 304 ntBASIC14.11□□□□□ -0.15
CHD8Q9HCK8 AC113347.2-201ENST00000512350 279 ntBASIC14.11□□□□□ -0.15
CHD8Q9HCK8 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC14.11□□□□□ -0.15
CHD8Q9HCK8 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC14.11□□□□□ -0.15
CHD8Q9HCK8 SRP19-208ENST00000621420 1270 ntTSL 3 BASIC14.11□□□□□ -0.15
CHD8Q9HCK8 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
CHD8Q9HCK8 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC14.11□□□□□ -0.15
CHD8Q9HCK8 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHD8Q9HCK8 AC244394.1-201ENST00000435000 1665 ntBASIC14.11□□□□□ -0.15
CHD8Q9HCK8 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHD8Q9HCK8 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHD8Q9HCK8 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CHD8Q9HCK8 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHD8Q9HCK8 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.11□□□□□ -0.15
CHD8Q9HCK8 WASH7P-201ENST00000488147 1351 ntBASIC14.11□□□□□ -0.15
CHD8Q9HCK8 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
CHD8Q9HCK8 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHD8Q9HCK8 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC14.11□□□□□ -0.15
CHD8Q9HCK8 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CHD8Q9HCK8 RPL3P5-201ENST00000441645 1232 ntBASIC14.11□□□□□ -0.15
CHD8Q9HCK8 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CHD8Q9HCK8 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC14.11□□□□□ -0.15
CHD8Q9HCK8 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHD8Q9HCK8 SRP14-204ENST00000558720 780 ntTSL 2 BASIC14.11□□□□□ -0.15
CHD8Q9HCK8 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHD8Q9HCK8 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHD8Q9HCK8 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CHD8Q9HCK8 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CHD8Q9HCK8 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CHD8Q9HCK8 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms