Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 AC104784.1-201ENST00000473096 294 ntBASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 RPL18P13-201ENST00000478088 569 ntBASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 AC019193.1-201ENST00000506678 823 ntBASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 AC242376.1-201ENST00000559033 726 ntBASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 DUX4L46-201ENST00000566845 751 ntBASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 MIR3147-201ENST00000577811 66 ntBASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CNTNAP4Q9C0A0 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNTNAP4Q9C0A0 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNTNAP4Q9C0A0 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNTNAP4Q9C0A0 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNTNAP4Q9C0A0 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CNTNAP4Q9C0A0 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC19.24■□□□□ 0.67
CNTNAP4Q9C0A0 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNTNAP4Q9C0A0 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNTNAP4Q9C0A0 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNTNAP4Q9C0A0 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNTNAP4Q9C0A0 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNTNAP4Q9C0A0 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CNTNAP4Q9C0A0 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNTNAP4Q9C0A0 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNTNAP4Q9C0A0 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CNTNAP4Q9C0A0 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNTNAP4Q9C0A0 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNTNAP4Q9C0A0 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CNTNAP4Q9C0A0 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNTNAP4Q9C0A0 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNTNAP4Q9C0A0 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNTNAP4Q9C0A0 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CNTNAP4Q9C0A0 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNTNAP4Q9C0A0 RN7SKP214-201ENST00000364208 315 ntBASIC19.24■□□□□ 0.67
CNTNAP4Q9C0A0 RBM38-204ENST00000371219 760 ntTSL 2 BASIC19.24■□□□□ 0.67
CNTNAP4Q9C0A0 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC19.24■□□□□ 0.67
CNTNAP4Q9C0A0 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC19.24■□□□□ 0.67
CNTNAP4Q9C0A0 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC19.24■□□□□ 0.67
CNTNAP4Q9C0A0 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC19.24■□□□□ 0.67
CNTNAP4Q9C0A0 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC19.24■□□□□ 0.67
CNTNAP4Q9C0A0 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC19.24■□□□□ 0.67
CNTNAP4Q9C0A0 MIR4754-201ENST00000582477 89 ntBASIC19.24■□□□□ 0.67
CNTNAP4Q9C0A0 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
CNTNAP4Q9C0A0 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC19.24■□□□□ 0.67
CNTNAP4Q9C0A0 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CNTNAP4Q9C0A0 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNTNAP4Q9C0A0 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNTNAP4Q9C0A0 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.23■□□□□ 0.67
CNTNAP4Q9C0A0 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNTNAP4Q9C0A0 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC19.23■□□□□ 0.67
CNTNAP4Q9C0A0 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CNTNAP4Q9C0A0 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CNTNAP4Q9C0A0 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNTNAP4Q9C0A0 GCK-209ENST00000616242 2260 ntTSL 5 BASIC19.23■□□□□ 0.67
CNTNAP4Q9C0A0 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNTNAP4Q9C0A0 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC19.23■□□□□ 0.67
CNTNAP4Q9C0A0 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC19.23■□□□□ 0.67
CNTNAP4Q9C0A0 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.23■□□□□ 0.67
CNTNAP4Q9C0A0 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC19.23■□□□□ 0.67
CNTNAP4Q9C0A0 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CNTNAP4Q9C0A0 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNTNAP4Q9C0A0 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CNTNAP4Q9C0A0 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CNTNAP4Q9C0A0 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
CNTNAP4Q9C0A0 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNTNAP4Q9C0A0 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC19.23■□□□□ 0.67
CNTNAP4Q9C0A0 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CNTNAP4Q9C0A0 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CNTNAP4Q9C0A0 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CNTNAP4Q9C0A0 FAM58BP-201ENST00000439056 645 ntBASIC19.23■□□□□ 0.67
CNTNAP4Q9C0A0 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CNTNAP4Q9C0A0 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC19.23■□□□□ 0.67
CNTNAP4Q9C0A0 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC19.23■□□□□ 0.67
CNTNAP4Q9C0A0 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC19.23■□□□□ 0.67
CNTNAP4Q9C0A0 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CNTNAP4Q9C0A0 AC009779.1-201ENST00000551138 283 ntBASIC19.23■□□□□ 0.67
CNTNAP4Q9C0A0 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC19.23■□□□□ 0.67
CNTNAP4Q9C0A0 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNTNAP4Q9C0A0 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC19.23■□□□□ 0.67
CNTNAP4Q9C0A0 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNTNAP4Q9C0A0 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC19.23■□□□□ 0.67
CNTNAP4Q9C0A0 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNTNAP4Q9C0A0 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNTNAP4Q9C0A0 E2F3P2-201ENST00000447755 1422 ntBASIC19.23■□□□□ 0.67
CNTNAP4Q9C0A0 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNTNAP4Q9C0A0 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNTNAP4Q9C0A0 AL360270.3-201ENST00000609118 1348 ntBASIC19.22■□□□□ 0.67
CNTNAP4Q9C0A0 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CNTNAP4Q9C0A0 AC009093.2-202ENST00000620513 2079 ntBASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms