Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC14.83□□□□□ -0.04
CNTNAP3Q9BZ76 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNTNAP3Q9BZ76 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC14.83□□□□□ -0.04
CNTNAP3Q9BZ76 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
CNTNAP3Q9BZ76 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CNTNAP3Q9BZ76 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CNTNAP3Q9BZ76 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNTNAP3Q9BZ76 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNTNAP3Q9BZ76 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNTNAP3Q9BZ76 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CNTNAP3Q9BZ76 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNTNAP3Q9BZ76 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.83□□□□□ -0.04
CNTNAP3Q9BZ76 AL021920.2-201ENST00000624828 1351 ntBASIC14.83□□□□□ -0.04
CNTNAP3Q9BZ76 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNTNAP3Q9BZ76 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNTNAP3Q9BZ76 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC14.83□□□□□ -0.04
CNTNAP3Q9BZ76 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNTNAP3Q9BZ76 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CNTNAP3Q9BZ76 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNTNAP3Q9BZ76 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.83□□□□□ -0.04
CNTNAP3Q9BZ76 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNTNAP3Q9BZ76 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNTNAP3Q9BZ76 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CNTNAP3Q9BZ76 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNTNAP3Q9BZ76 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNTNAP3Q9BZ76 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNTNAP3Q9BZ76 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.82□□□□□ -0.04
CNTNAP3Q9BZ76 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CNTNAP3Q9BZ76 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.82□□□□□ -0.04
CNTNAP3Q9BZ76 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNTNAP3Q9BZ76 AL354989.2-201ENST00000435838 1540 ntBASIC14.82□□□□□ -0.04
CNTNAP3Q9BZ76 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CNTNAP3Q9BZ76 CICP6-201ENST00000457191 2729 ntBASIC14.82□□□□□ -0.04
CNTNAP3Q9BZ76 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNTNAP3Q9BZ76 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNTNAP3Q9BZ76 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.82□□□□□ -0.04
CNTNAP3Q9BZ76 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CNTNAP3Q9BZ76 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNTNAP3Q9BZ76 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNTNAP3Q9BZ76 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CNTNAP3Q9BZ76 AC079178.1-201ENST00000420915 656 ntBASIC14.82□□□□□ -0.04
CNTNAP3Q9BZ76 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CNTNAP3Q9BZ76 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC14.82□□□□□ -0.04
CNTNAP3Q9BZ76 AC093724.1-201ENST00000448659 1027 ntBASIC14.82□□□□□ -0.04
CNTNAP3Q9BZ76 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC14.82□□□□□ -0.04
CNTNAP3Q9BZ76 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.82□□□□□ -0.04
CNTNAP3Q9BZ76 RTN3P1-201ENST00000536295 711 ntBASIC14.82□□□□□ -0.04
CNTNAP3Q9BZ76 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.82□□□□□ -0.04
CNTNAP3Q9BZ76 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC14.82□□□□□ -0.04
CNTNAP3Q9BZ76 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC14.82□□□□□ -0.04
CNTNAP3Q9BZ76 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.82□□□□□ -0.04
CNTNAP3Q9BZ76 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
CNTNAP3Q9BZ76 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.82□□□□□ -0.04
CNTNAP3Q9BZ76 YRDCP1-201ENST00000621419 643 ntBASIC14.82□□□□□ -0.04
CNTNAP3Q9BZ76 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CNTNAP3Q9BZ76 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.82□□□□□ -0.04
CNTNAP3Q9BZ76 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.82□□□□□ -0.04
CNTNAP3Q9BZ76 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNTNAP3Q9BZ76 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNTNAP3Q9BZ76 KRT8P35-201ENST00000483942 1338 ntBASIC14.82□□□□□ -0.04
CNTNAP3Q9BZ76 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNTNAP3Q9BZ76 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CNTNAP3Q9BZ76 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNTNAP3Q9BZ76 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNTNAP3Q9BZ76 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CNTNAP3Q9BZ76 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.82□□□□□ -0.04
CNTNAP3Q9BZ76 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.82□□□□□ -0.04
CNTNAP3Q9BZ76 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNTNAP3Q9BZ76 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.82□□□□□ -0.04
CNTNAP3Q9BZ76 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNTNAP3Q9BZ76 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNTNAP3Q9BZ76 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CNTNAP3Q9BZ76 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CNTNAP3Q9BZ76 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNTNAP3Q9BZ76 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC14.81□□□□□ -0.04
CNTNAP3Q9BZ76 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNTNAP3Q9BZ76 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CNTNAP3Q9BZ76 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNTNAP3Q9BZ76 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC14.81□□□□□ -0.04
CNTNAP3Q9BZ76 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CNTNAP3Q9BZ76 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC14.81□□□□□ -0.04
CNTNAP3Q9BZ76 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNTNAP3Q9BZ76 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.81□□□□□ -0.04
CNTNAP3Q9BZ76 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.81□□□□□ -0.04
CNTNAP3Q9BZ76 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNTNAP3Q9BZ76 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CNTNAP3Q9BZ76 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNTNAP3Q9BZ76 CD8B2-202ENST00000417670 633 ntBASIC14.81□□□□□ -0.04
CNTNAP3Q9BZ76 RPS9P1-201ENST00000419943 583 ntBASIC14.81□□□□□ -0.04
CNTNAP3Q9BZ76 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CNTNAP3Q9BZ76 AC006335.1-201ENST00000445200 547 ntBASIC14.81□□□□□ -0.04
CNTNAP3Q9BZ76 AC116345.2-201ENST00000512837 523 ntBASIC14.81□□□□□ -0.04
CNTNAP3Q9BZ76 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC14.81□□□□□ -0.04
CNTNAP3Q9BZ76 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.81□□□□□ -0.04
CNTNAP3Q9BZ76 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC14.81□□□□□ -0.04
CNTNAP3Q9BZ76 AC244157.2-201ENST00000616239 1006 ntBASIC14.81□□□□□ -0.04
CNTNAP3Q9BZ76 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.81□□□□□ -0.04
CNTNAP3Q9BZ76 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNTNAP3Q9BZ76 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CNTNAP3Q9BZ76 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms