Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 BX664615.1-201ENST00000443558 458 ntBASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 AC112907.2-201ENST00000448639 330 ntBASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 AC245100.5-201ENST00000452108 331 ntBASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 MINOS1P3-201ENST00000457048 203 ntBASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 VENTXP5-201ENST00000523979 775 ntBASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 AL139317.3-201ENST00000555969 898 ntTSL 2 BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 AL160237.2-201ENST00000556165 472 ntBASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 USP36-216ENST00000589424 970 ntTSL 5 BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 AL365330.1-201ENST00000607459 531 ntBASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 WDR6-223ENST00000627177 207 ntTSL 2 BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 AP000867.4-201ENST00000641616 219 ntBASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 AF228730.7-201ENST00000641842 219 ntBASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 KRT8P44-201ENST00000441609 1350 ntBASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 DMBT1-201ENST00000330163 5802 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 DMBT1-206ENST00000368956 5802 ntTSL 5 BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 FAM131B-203ENST00000409408 5856 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC4.24□□□□□ -1.73
LCE3DQ9BYE3 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 PITPNM3-202ENST00000421306 6945 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 AC006480.2-201ENST00000609770 1337 ntBASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms