Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
RSPO3Q9BXY4 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
RSPO3Q9BXY4 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.27□□□□□ -0.13
RSPO3Q9BXY4 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
RSPO3Q9BXY4 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RSPO3Q9BXY4 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
RSPO3Q9BXY4 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.27□□□□□ -0.13
RSPO3Q9BXY4 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RSPO3Q9BXY4 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
RSPO3Q9BXY4 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.27□□□□□ -0.13
RSPO3Q9BXY4 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RSPO3Q9BXY4 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RSPO3Q9BXY4 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RSPO3Q9BXY4 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RSPO3Q9BXY4 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
RSPO3Q9BXY4 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RSPO3Q9BXY4 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RSPO3Q9BXY4 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RSPO3Q9BXY4 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.26□□□□□ -0.13
RSPO3Q9BXY4 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RSPO3Q9BXY4 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.26□□□□□ -0.13
RSPO3Q9BXY4 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RSPO3Q9BXY4 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RSPO3Q9BXY4 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
RSPO3Q9BXY4 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
RSPO3Q9BXY4 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RSPO3Q9BXY4 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
RSPO3Q9BXY4 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.26□□□□□ -0.13
RSPO3Q9BXY4 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.26□□□□□ -0.13
RSPO3Q9BXY4 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.26□□□□□ -0.13
RSPO3Q9BXY4 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.26□□□□□ -0.13
RSPO3Q9BXY4 AC097493.3-201ENST00000509725 367 ntBASIC14.26□□□□□ -0.13
RSPO3Q9BXY4 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.26□□□□□ -0.13
RSPO3Q9BXY4 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.26□□□□□ -0.13
RSPO3Q9BXY4 SNHG9-202ENST00000564014 471 ntBASIC14.26□□□□□ -0.13
RSPO3Q9BXY4 AC015911.4-201ENST00000588022 1070 ntBASIC14.26□□□□□ -0.13
RSPO3Q9BXY4 AC074044.1-201ENST00000609673 707 ntBASIC14.26□□□□□ -0.13
RSPO3Q9BXY4 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.26□□□□□ -0.13
RSPO3Q9BXY4 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RSPO3Q9BXY4 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.26□□□□□ -0.13
RSPO3Q9BXY4 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.26□□□□□ -0.13
RSPO3Q9BXY4 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
RSPO3Q9BXY4 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
RSPO3Q9BXY4 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
RSPO3Q9BXY4 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RSPO3Q9BXY4 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
RSPO3Q9BXY4 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.26□□□□□ -0.13
RSPO3Q9BXY4 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
RSPO3Q9BXY4 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RSPO3Q9BXY4 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO3Q9BXY4 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO3Q9BXY4 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.25□□□□□ -0.13
RSPO3Q9BXY4 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO3Q9BXY4 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.25□□□□□ -0.13
RSPO3Q9BXY4 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO3Q9BXY4 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO3Q9BXY4 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO3Q9BXY4 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO3Q9BXY4 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO3Q9BXY4 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO3Q9BXY4 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO3Q9BXY4 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO3Q9BXY4 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
RSPO3Q9BXY4 KRT18P13-201ENST00000400056 1290 ntBASIC14.25□□□□□ -0.13
RSPO3Q9BXY4 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.25□□□□□ -0.13
RSPO3Q9BXY4 FAM8A3P-201ENST00000427218 844 ntBASIC14.25□□□□□ -0.13
RSPO3Q9BXY4 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO3Q9BXY4 AL589987.1-201ENST00000453380 819 ntBASIC14.25□□□□□ -0.13
RSPO3Q9BXY4 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.25□□□□□ -0.13
RSPO3Q9BXY4 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.25□□□□□ -0.13
RSPO3Q9BXY4 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.25□□□□□ -0.13
RSPO3Q9BXY4 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
RSPO3Q9BXY4 AC009407.1-201ENST00000568958 598 ntBASIC14.25□□□□□ -0.13
RSPO3Q9BXY4 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.25□□□□□ -0.13
RSPO3Q9BXY4 AC004790.1-201ENST00000612686 536 ntBASIC14.25□□□□□ -0.13
RSPO3Q9BXY4 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.25□□□□□ -0.13
RSPO3Q9BXY4 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.25□□□□□ -0.13
RSPO3Q9BXY4 AC073592.8-201ENST00000624126 511 ntBASIC14.25□□□□□ -0.13
RSPO3Q9BXY4 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.25□□□□□ -0.13
RSPO3Q9BXY4 AL645728.2-202ENST00000641679 227 ntBASIC14.25□□□□□ -0.13
RSPO3Q9BXY4 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO3Q9BXY4 AP001267.2-201ENST00000532619 2086 ntBASIC14.25□□□□□ -0.13
RSPO3Q9BXY4 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO3Q9BXY4 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO3Q9BXY4 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO3Q9BXY4 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO3Q9BXY4 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
RSPO3Q9BXY4 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
RSPO3Q9BXY4 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.25□□□□□ -0.13
RSPO3Q9BXY4 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO3Q9BXY4 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.25□□□□□ -0.13
RSPO3Q9BXY4 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO3Q9BXY4 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO3Q9BXY4 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.25□□□□□ -0.13
RSPO3Q9BXY4 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
RSPO3Q9BXY4 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO3Q9BXY4 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO3Q9BXY4 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
RSPO3Q9BXY4 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RSPO3Q9BXY4 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms