Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC15.32■□□□□ 0.04
COL25A1Q9BXS0 AL158070.2-201ENST00000623713 1621 ntBASIC15.32■□□□□ 0.04
COL25A1Q9BXS0 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COL25A1Q9BXS0 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC15.32■□□□□ 0.04
COL25A1Q9BXS0 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
COL25A1Q9BXS0 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
COL25A1Q9BXS0 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
COL25A1Q9BXS0 EML3-217ENST00000531557 2509 ntTSL 5 BASIC15.32■□□□□ 0.04
COL25A1Q9BXS0 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
COL25A1Q9BXS0 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
COL25A1Q9BXS0 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC15.32■□□□□ 0.04
COL25A1Q9BXS0 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COL25A1Q9BXS0 HNRNPABP1-201ENST00000406003 734 ntBASIC15.32■□□□□ 0.04
COL25A1Q9BXS0 STK33P1-201ENST00000423835 1218 ntBASIC15.32■□□□□ 0.04
COL25A1Q9BXS0 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC15.32■□□□□ 0.04
COL25A1Q9BXS0 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC15.32■□□□□ 0.04
COL25A1Q9BXS0 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC15.32■□□□□ 0.04
COL25A1Q9BXS0 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC15.32■□□□□ 0.04
COL25A1Q9BXS0 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC15.32■□□□□ 0.04
COL25A1Q9BXS0 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC15.32■□□□□ 0.04
COL25A1Q9BXS0 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
COL25A1Q9BXS0 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC15.32■□□□□ 0.04
COL25A1Q9BXS0 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC15.32■□□□□ 0.04
COL25A1Q9BXS0 ACTBP9-201ENST00000587663 1099 ntBASIC15.32■□□□□ 0.04
COL25A1Q9BXS0 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
COL25A1Q9BXS0 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
COL25A1Q9BXS0 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC15.32■□□□□ 0.04
COL25A1Q9BXS0 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
COL25A1Q9BXS0 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
COL25A1Q9BXS0 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COL25A1Q9BXS0 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC15.32■□□□□ 0.04
COL25A1Q9BXS0 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
COL25A1Q9BXS0 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.32■□□□□ 0.04
COL25A1Q9BXS0 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COL25A1Q9BXS0 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
COL25A1Q9BXS0 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
COL25A1Q9BXS0 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COL25A1Q9BXS0 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.31■□□□□ 0.04
COL25A1Q9BXS0 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
COL25A1Q9BXS0 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
COL25A1Q9BXS0 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
COL25A1Q9BXS0 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
COL25A1Q9BXS0 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.31■□□□□ 0.04
COL25A1Q9BXS0 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC15.31■□□□□ 0.04
COL25A1Q9BXS0 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
COL25A1Q9BXS0 RN7SKP175-201ENST00000408472 289 ntBASIC15.31■□□□□ 0.04
COL25A1Q9BXS0 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC15.31■□□□□ 0.04
COL25A1Q9BXS0 TPT1P6-201ENST00000458298 514 ntBASIC15.31■□□□□ 0.04
COL25A1Q9BXS0 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC15.31■□□□□ 0.04
COL25A1Q9BXS0 RPS18P9-201ENST00000482817 460 ntBASIC15.31■□□□□ 0.04
COL25A1Q9BXS0 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
COL25A1Q9BXS0 AC007250.1-201ENST00000608934 338 ntBASIC15.31■□□□□ 0.04
COL25A1Q9BXS0 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.31■□□□□ 0.04
COL25A1Q9BXS0 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC15.31■□□□□ 0.04
COL25A1Q9BXS0 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC15.31■□□□□ 0.04
COL25A1Q9BXS0 AL357143.1-203ENST00000639750 881 ntBASIC15.31■□□□□ 0.04
COL25A1Q9BXS0 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC15.31■□□□□ 0.04
COL25A1Q9BXS0 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COL25A1Q9BXS0 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.31■□□□□ 0.04
COL25A1Q9BXS0 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
COL25A1Q9BXS0 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COL25A1Q9BXS0 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COL25A1Q9BXS0 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COL25A1Q9BXS0 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC15.31■□□□□ 0.04
COL25A1Q9BXS0 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COL25A1Q9BXS0 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.31■□□□□ 0.04
COL25A1Q9BXS0 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.31■□□□□ 0.04
COL25A1Q9BXS0 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COL25A1Q9BXS0 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COL25A1Q9BXS0 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
COL25A1Q9BXS0 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.31■□□□□ 0.04
COL25A1Q9BXS0 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
COL25A1Q9BXS0 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC15.31■□□□□ 0.04
COL25A1Q9BXS0 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
COL25A1Q9BXS0 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COL25A1Q9BXS0 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC15.3■□□□□ 0.04
COL25A1Q9BXS0 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
COL25A1Q9BXS0 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COL25A1Q9BXS0 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
COL25A1Q9BXS0 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
COL25A1Q9BXS0 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
COL25A1Q9BXS0 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COL25A1Q9BXS0 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COL25A1Q9BXS0 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
COL25A1Q9BXS0 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COL25A1Q9BXS0 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
COL25A1Q9BXS0 LYRM1-202ENST00000396052 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COL25A1Q9BXS0 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COL25A1Q9BXS0 AL157823.1-201ENST00000403727 628 ntBASIC15.3■□□□□ 0.04
COL25A1Q9BXS0 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
COL25A1Q9BXS0 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
COL25A1Q9BXS0 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC15.3■□□□□ 0.04
COL25A1Q9BXS0 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC15.3■□□□□ 0.04
COL25A1Q9BXS0 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
COL25A1Q9BXS0 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC15.3■□□□□ 0.04
COL25A1Q9BXS0 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
COL25A1Q9BXS0 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC15.3■□□□□ 0.04
COL25A1Q9BXS0 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
COL25A1Q9BXS0 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.3■□□□□ 0.04
COL25A1Q9BXS0 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms