Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.3□□□□□ -0.12
SNX18Q96RF0 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNX18Q96RF0 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SNX18Q96RF0 AC136621.1-201ENST00000624017 2304 ntBASIC14.3□□□□□ -0.12
SNX18Q96RF0 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SNX18Q96RF0 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SNX18Q96RF0 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNX18Q96RF0 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNX18Q96RF0 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNX18Q96RF0 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SNX18Q96RF0 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.29□□□□□ -0.12
SNX18Q96RF0 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SNX18Q96RF0 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SNX18Q96RF0 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.29□□□□□ -0.12
SNX18Q96RF0 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.29□□□□□ -0.12
SNX18Q96RF0 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SNX18Q96RF0 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.29□□□□□ -0.12
SNX18Q96RF0 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.29□□□□□ -0.12
SNX18Q96RF0 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SNX18Q96RF0 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.29□□□□□ -0.12
SNX18Q96RF0 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
SNX18Q96RF0 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SNX18Q96RF0 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.29□□□□□ -0.12
SNX18Q96RF0 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
SNX18Q96RF0 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.29□□□□□ -0.12
SNX18Q96RF0 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.29□□□□□ -0.12
SNX18Q96RF0 EEF1DP4-201ENST00000446006 880 ntBASIC14.29□□□□□ -0.12
SNX18Q96RF0 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.29□□□□□ -0.12
SNX18Q96RF0 ACTG1P14-201ENST00000446382 1122 ntBASIC14.29□□□□□ -0.12
SNX18Q96RF0 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SNX18Q96RF0 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
SNX18Q96RF0 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SNX18Q96RF0 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
SNX18Q96RF0 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.29□□□□□ -0.12
SNX18Q96RF0 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.29□□□□□ -0.12
SNX18Q96RF0 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.29□□□□□ -0.12
SNX18Q96RF0 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SNX18Q96RF0 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.29□□□□□ -0.12
SNX18Q96RF0 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.29□□□□□ -0.12
SNX18Q96RF0 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SNX18Q96RF0 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SNX18Q96RF0 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SNX18Q96RF0 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SNX18Q96RF0 PRAL-201ENST00000624952 3286 ntBASIC14.29□□□□□ -0.12
SNX18Q96RF0 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
SNX18Q96RF0 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SNX18Q96RF0 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.29□□□□□ -0.12
SNX18Q96RF0 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.29□□□□□ -0.12
SNX18Q96RF0 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SNX18Q96RF0 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
SNX18Q96RF0 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SNX18Q96RF0 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SNX18Q96RF0 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SNX18Q96RF0 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SNX18Q96RF0 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SNX18Q96RF0 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SNX18Q96RF0 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SNX18Q96RF0 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SNX18Q96RF0 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SNX18Q96RF0 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SNX18Q96RF0 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SNX18Q96RF0 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
SNX18Q96RF0 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SNX18Q96RF0 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SNX18Q96RF0 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SNX18Q96RF0 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SNX18Q96RF0 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SNX18Q96RF0 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.28□□□□□ -0.12
SNX18Q96RF0 HLA-H-201ENST00000383620 1096 ntBASIC14.28□□□□□ -0.12
SNX18Q96RF0 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.28□□□□□ -0.12
SNX18Q96RF0 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SNX18Q96RF0 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.28□□□□□ -0.12
SNX18Q96RF0 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.28□□□□□ -0.12
SNX18Q96RF0 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SNX18Q96RF0 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SNX18Q96RF0 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SNX18Q96RF0 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SNX18Q96RF0 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.28□□□□□ -0.12
SNX18Q96RF0 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SNX18Q96RF0 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.28□□□□□ -0.12
SNX18Q96RF0 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.28□□□□□ -0.12
SNX18Q96RF0 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.28□□□□□ -0.12
SNX18Q96RF0 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SNX18Q96RF0 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SNX18Q96RF0 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SNX18Q96RF0 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.28□□□□□ -0.12
SNX18Q96RF0 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SNX18Q96RF0 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
SNX18Q96RF0 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.28□□□□□ -0.12
SNX18Q96RF0 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.28□□□□□ -0.12
SNX18Q96RF0 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.28□□□□□ -0.12
SNX18Q96RF0 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.28□□□□□ -0.12
SNX18Q96RF0 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.28□□□□□ -0.12
SNX18Q96RF0 AC084121.4-201ENST00000641598 221 ntBASIC14.28□□□□□ -0.12
SNX18Q96RF0 AC092902.6-201ENST00000641783 218 ntBASIC14.28□□□□□ -0.12
SNX18Q96RF0 AF228730.8-201ENST00000642140 221 ntBASIC14.28□□□□□ -0.12
SNX18Q96RF0 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SNX18Q96RF0 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SNX18Q96RF0 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SNX18Q96RF0 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms