Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSPG4P5Q96PW8 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSPG4P5Q96PW8 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSPG4P5Q96PW8 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSPG4P5Q96PW8 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.05■□□□□ 0.16
CSPG4P5Q96PW8 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.05■□□□□ 0.16
CSPG4P5Q96PW8 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.05■□□□□ 0.16
CSPG4P5Q96PW8 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.05■□□□□ 0.16
CSPG4P5Q96PW8 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.05■□□□□ 0.16
CSPG4P5Q96PW8 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.05■□□□□ 0.16
CSPG4P5Q96PW8 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.05■□□□□ 0.16
CSPG4P5Q96PW8 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.05■□□□□ 0.16
CSPG4P5Q96PW8 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.05■□□□□ 0.16
CSPG4P5Q96PW8 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.05■□□□□ 0.16
CSPG4P5Q96PW8 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.05■□□□□ 0.16
CSPG4P5Q96PW8 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.05■□□□□ 0.16
CSPG4P5Q96PW8 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CSPG4P5Q96PW8 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CSPG4P5Q96PW8 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSPG4P5Q96PW8 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSPG4P5Q96PW8 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSPG4P5Q96PW8 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CSPG4P5Q96PW8 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CSPG4P5Q96PW8 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CSPG4P5Q96PW8 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CSPG4P5Q96PW8 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CSPG4P5Q96PW8 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.05■□□□□ 0.16
CSPG4P5Q96PW8 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CSPG4P5Q96PW8 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CSPG4P5Q96PW8 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.04■□□□□ 0.16
CSPG4P5Q96PW8 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.04■□□□□ 0.16
CSPG4P5Q96PW8 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.04■□□□□ 0.16
CSPG4P5Q96PW8 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSPG4P5Q96PW8 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSPG4P5Q96PW8 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSPG4P5Q96PW8 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CSPG4P5Q96PW8 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CSPG4P5Q96PW8 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSPG4P5Q96PW8 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CSPG4P5Q96PW8 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSPG4P5Q96PW8 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.04■□□□□ 0.16
CSPG4P5Q96PW8 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.04■□□□□ 0.16
CSPG4P5Q96PW8 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CSPG4P5Q96PW8 RNA5SP421-201ENST00000516864 134 ntBASIC16.04■□□□□ 0.16
CSPG4P5Q96PW8 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.04■□□□□ 0.16
CSPG4P5Q96PW8 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.04■□□□□ 0.16
CSPG4P5Q96PW8 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.04■□□□□ 0.16
CSPG4P5Q96PW8 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.04■□□□□ 0.16
CSPG4P5Q96PW8 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.04■□□□□ 0.16
CSPG4P5Q96PW8 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSPG4P5Q96PW8 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSPG4P5Q96PW8 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.04■□□□□ 0.16
CSPG4P5Q96PW8 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSPG4P5Q96PW8 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSPG4P5Q96PW8 MROH4P-201ENST00000431302 1578 ntBASIC16.04■□□□□ 0.16
CSPG4P5Q96PW8 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.04■□□□□ 0.16
CSPG4P5Q96PW8 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CSPG4P5Q96PW8 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSPG4P5Q96PW8 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSPG4P5Q96PW8 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CSPG4P5Q96PW8 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSPG4P5Q96PW8 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSPG4P5Q96PW8 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSPG4P5Q96PW8 CLK3P2-201ENST00000427566 1453 ntBASIC16.03■□□□□ 0.16
CSPG4P5Q96PW8 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSPG4P5Q96PW8 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSPG4P5Q96PW8 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CSPG4P5Q96PW8 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSPG4P5Q96PW8 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSPG4P5Q96PW8 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.03■□□□□ 0.16
CSPG4P5Q96PW8 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CSPG4P5Q96PW8 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CSPG4P5Q96PW8 AGAP7P-201ENST00000582299 2062 ntBASIC16.03■□□□□ 0.16
CSPG4P5Q96PW8 AGAP14-201ENST00000624701 2060 ntBASIC16.03■□□□□ 0.16
CSPG4P5Q96PW8 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CSPG4P5Q96PW8 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.03■□□□□ 0.16
CSPG4P5Q96PW8 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CSPG4P5Q96PW8 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.03■□□□□ 0.16
CSPG4P5Q96PW8 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CSPG4P5Q96PW8 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.03■□□□□ 0.16
CSPG4P5Q96PW8 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.03■□□□□ 0.16
CSPG4P5Q96PW8 GHSR-202ENST00000427970 912 ntBASIC16.03■□□□□ 0.16
CSPG4P5Q96PW8 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.03■□□□□ 0.16
CSPG4P5Q96PW8 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.03■□□□□ 0.16
CSPG4P5Q96PW8 UGT1A2P-201ENST00000454886 866 ntBASIC16.03■□□□□ 0.16
CSPG4P5Q96PW8 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CSPG4P5Q96PW8 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.03■□□□□ 0.16
CSPG4P5Q96PW8 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.03■□□□□ 0.16
CSPG4P5Q96PW8 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.03■□□□□ 0.16
CSPG4P5Q96PW8 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CSPG4P5Q96PW8 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.03■□□□□ 0.16
CSPG4P5Q96PW8 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.03■□□□□ 0.16
CSPG4P5Q96PW8 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CSPG4P5Q96PW8 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSPG4P5Q96PW8 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSPG4P5Q96PW8 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CSPG4P5Q96PW8 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSPG4P5Q96PW8 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CSPG4P5Q96PW8 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.03■□□□□ 0.16
CSPG4P5Q96PW8 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms