Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CASD1Q96PB1 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CASD1Q96PB1 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.43■□□□□ 0.22
CASD1Q96PB1 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CASD1Q96PB1 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CASD1Q96PB1 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CASD1Q96PB1 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.43■□□□□ 0.22
CASD1Q96PB1 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CASD1Q96PB1 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CASD1Q96PB1 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CASD1Q96PB1 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CASD1Q96PB1 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.43■□□□□ 0.22
CASD1Q96PB1 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CASD1Q96PB1 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.43■□□□□ 0.22
CASD1Q96PB1 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CASD1Q96PB1 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CASD1Q96PB1 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC16.43■□□□□ 0.22
CASD1Q96PB1 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC16.43■□□□□ 0.22
CASD1Q96PB1 RGS5-214ENST00000429865 754 ntTSL 3 BASIC16.43■□□□□ 0.22
CASD1Q96PB1 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC16.43■□□□□ 0.22
CASD1Q96PB1 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
CASD1Q96PB1 AC005077.2-201ENST00000449786 690 ntBASIC16.43■□□□□ 0.22
CASD1Q96PB1 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC16.43■□□□□ 0.22
CASD1Q96PB1 HIST2H2BC-201ENST00000498492 580 ntBASIC16.43■□□□□ 0.22
CASD1Q96PB1 AL391280.1-201ENST00000506969 1062 ntBASIC16.43■□□□□ 0.22
CASD1Q96PB1 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC16.43■□□□□ 0.22
CASD1Q96PB1 AC126915.1-201ENST00000522847 1038 ntBASIC16.43■□□□□ 0.22
CASD1Q96PB1 RHOQP1-201ENST00000555758 579 ntBASIC16.43■□□□□ 0.22
CASD1Q96PB1 AL451050.2-201ENST00000606967 682 ntBASIC16.43■□□□□ 0.22
CASD1Q96PB1 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CASD1Q96PB1 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.43■□□□□ 0.22
CASD1Q96PB1 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
CASD1Q96PB1 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CASD1Q96PB1 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CASD1Q96PB1 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
CASD1Q96PB1 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.43■□□□□ 0.22
CASD1Q96PB1 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.43■□□□□ 0.22
CASD1Q96PB1 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CASD1Q96PB1 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.43■□□□□ 0.22
CASD1Q96PB1 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CASD1Q96PB1 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC16.43■□□□□ 0.22
CASD1Q96PB1 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.42■□□□□ 0.22
CASD1Q96PB1 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CASD1Q96PB1 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CASD1Q96PB1 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.42■□□□□ 0.22
CASD1Q96PB1 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CASD1Q96PB1 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.42■□□□□ 0.22
CASD1Q96PB1 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CASD1Q96PB1 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CASD1Q96PB1 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CASD1Q96PB1 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.42■□□□□ 0.22
CASD1Q96PB1 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CASD1Q96PB1 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
CASD1Q96PB1 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CASD1Q96PB1 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC16.42■□□□□ 0.22
CASD1Q96PB1 CSH2-202ENST00000345366 598 ntTSL 5 BASIC16.42■□□□□ 0.22
CASD1Q96PB1 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CASD1Q96PB1 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC16.42■□□□□ 0.22
CASD1Q96PB1 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC16.42■□□□□ 0.22
CASD1Q96PB1 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CASD1Q96PB1 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC16.42■□□□□ 0.22
CASD1Q96PB1 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC16.42■□□□□ 0.22
CASD1Q96PB1 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC16.42■□□□□ 0.22
CASD1Q96PB1 NKG7-204ENST00000595217 816 ntTSL 2 BASIC16.42■□□□□ 0.22
CASD1Q96PB1 OR6D1P-203ENST00000641209 4860 ntBASIC16.42■□□□□ 0.22
CASD1Q96PB1 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CASD1Q96PB1 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CASD1Q96PB1 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CASD1Q96PB1 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CASD1Q96PB1 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CASD1Q96PB1 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CASD1Q96PB1 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CASD1Q96PB1 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CASD1Q96PB1 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CASD1Q96PB1 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.41■□□□□ 0.22
CASD1Q96PB1 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CASD1Q96PB1 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CASD1Q96PB1 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
CASD1Q96PB1 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CASD1Q96PB1 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CASD1Q96PB1 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CASD1Q96PB1 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.41■□□□□ 0.22
CASD1Q96PB1 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CASD1Q96PB1 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CASD1Q96PB1 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CASD1Q96PB1 AC104457.1-201ENST00000401024 814 ntBASIC16.41■□□□□ 0.22
CASD1Q96PB1 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CASD1Q96PB1 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CASD1Q96PB1 HNRNPA1P63-201ENST00000427917 963 ntBASIC16.41■□□□□ 0.22
CASD1Q96PB1 HLA-K-203ENST00000430151 1046 ntBASIC16.41■□□□□ 0.22
CASD1Q96PB1 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.41■□□□□ 0.22
CASD1Q96PB1 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC16.41■□□□□ 0.22
CASD1Q96PB1 REEP1-202ENST00000453231 940 ntTSL 2 BASIC16.41■□□□□ 0.22
CASD1Q96PB1 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.41■□□□□ 0.22
CASD1Q96PB1 ADM-202ENST00000524948 584 ntTSL 2 BASIC16.41■□□□□ 0.22
CASD1Q96PB1 AC106820.3-201ENST00000561653 397 ntBASIC16.41■□□□□ 0.22
CASD1Q96PB1 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC16.41■□□□□ 0.22
CASD1Q96PB1 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC16.41■□□□□ 0.22
CASD1Q96PB1 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.41■□□□□ 0.22
CASD1Q96PB1 AL603764.1-201ENST00000636452 321 ntBASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms