Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 ACTG1P14-201ENST00000446382 1122 ntBASIC13.64□□□□□ -0.23
CPNE2Q96FN4 SPDYE11-202ENST00000450699 704 ntBASIC13.64□□□□□ -0.23
CPNE2Q96FN4 KRT18P3-201ENST00000451602 1288 ntBASIC13.64□□□□□ -0.23
CPNE2Q96FN4 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 SPDYE9P-201ENST00000570642 692 ntBASIC13.64□□□□□ -0.23
CPNE2Q96FN4 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 SPDYE10P-202ENST00000612005 668 ntBASIC13.64□□□□□ -0.23
CPNE2Q96FN4 SPDYE8P-202ENST00000612377 668 ntBASIC13.64□□□□□ -0.23
CPNE2Q96FN4 AC091812.2-201ENST00000619081 385 ntBASIC13.64□□□□□ -0.23
CPNE2Q96FN4 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 AC126365.1-201ENST00000578585 1514 ntBASIC13.64□□□□□ -0.23
CPNE2Q96FN4 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 IL9RP2-201ENST00000423948 1312 ntBASIC13.64□□□□□ -0.23
CPNE2Q96FN4 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPNE2Q96FN4 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CPNE2Q96FN4 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
CPNE2Q96FN4 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.63□□□□□ -0.23
CPNE2Q96FN4 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.63□□□□□ -0.23
CPNE2Q96FN4 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC13.63□□□□□ -0.23
CPNE2Q96FN4 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CPNE2Q96FN4 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.63□□□□□ -0.23
CPNE2Q96FN4 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CPNE2Q96FN4 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CPNE2Q96FN4 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CPNE2Q96FN4 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CPNE2Q96FN4 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CPNE2Q96FN4 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CPNE2Q96FN4 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CPNE2Q96FN4 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CPNE2Q96FN4 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.63□□□□□ -0.23
CPNE2Q96FN4 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
CPNE2Q96FN4 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CPNE2Q96FN4 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CPNE2Q96FN4 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC13.63□□□□□ -0.23
CPNE2Q96FN4 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC13.63□□□□□ -0.23
CPNE2Q96FN4 AC142381.1-201ENST00000426099 345 ntBASIC13.63□□□□□ -0.23
CPNE2Q96FN4 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.63□□□□□ -0.23
CPNE2Q96FN4 KRT18P2-201ENST00000447938 1258 ntBASIC13.63□□□□□ -0.23
CPNE2Q96FN4 AC009078.2-202ENST00000463353 338 ntBASIC13.63□□□□□ -0.23
CPNE2Q96FN4 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
CPNE2Q96FN4 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.63□□□□□ -0.23
CPNE2Q96FN4 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC13.63□□□□□ -0.23
CPNE2Q96FN4 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CPNE2Q96FN4 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CPNE2Q96FN4 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CPNE2Q96FN4 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
CPNE2Q96FN4 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CPNE2Q96FN4 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.63□□□□□ -0.23
CPNE2Q96FN4 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.63□□□□□ -0.23
CPNE2Q96FN4 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CPNE2Q96FN4 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CPNE2Q96FN4 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CPNE2Q96FN4 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CPNE2Q96FN4 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CPNE2Q96FN4 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CPNE2Q96FN4 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.63□□□□□ -0.23
CPNE2Q96FN4 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CPNE2Q96FN4 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CPNE2Q96FN4 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC13.63□□□□□ -0.23
CPNE2Q96FN4 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.63□□□□□ -0.23
CPNE2Q96FN4 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
CPNE2Q96FN4 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CPNE2Q96FN4 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.63□□□□□ -0.23
CPNE2Q96FN4 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CPNE2Q96FN4 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms