Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.05■□□□□ -0
VPS33AQ96AX1 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.05■□□□□ -0
VPS33AQ96AX1 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VPS33AQ96AX1 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.05■□□□□ -0
VPS33AQ96AX1 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.05■□□□□ -0
VPS33AQ96AX1 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
VPS33AQ96AX1 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VPS33AQ96AX1 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.05■□□□□ -0
VPS33AQ96AX1 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
VPS33AQ96AX1 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
VPS33AQ96AX1 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VPS33AQ96AX1 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.05■□□□□ -0
VPS33AQ96AX1 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.05■□□□□ -0
VPS33AQ96AX1 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.05■□□□□ -0
VPS33AQ96AX1 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.05■□□□□ -0
VPS33AQ96AX1 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VPS33AQ96AX1 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VPS33AQ96AX1 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.05■□□□□ -0
VPS33AQ96AX1 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
VPS33AQ96AX1 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.05■□□□□ -0
VPS33AQ96AX1 AC005089.1-201ENST00000619486 2241 ntBASIC15.05■□□□□ -0
VPS33AQ96AX1 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
VPS33AQ96AX1 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
VPS33AQ96AX1 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.05■□□□□ -0
VPS33AQ96AX1 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
VPS33AQ96AX1 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
VPS33AQ96AX1 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VPS33AQ96AX1 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.05■□□□□ -0
VPS33AQ96AX1 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VPS33AQ96AX1 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
VPS33AQ96AX1 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VPS33AQ96AX1 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.04■□□□□ -0
VPS33AQ96AX1 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
VPS33AQ96AX1 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.04■□□□□ -0
VPS33AQ96AX1 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.04■□□□□ -0
VPS33AQ96AX1 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
VPS33AQ96AX1 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.04■□□□□ -0
VPS33AQ96AX1 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.04■□□□□ -0
VPS33AQ96AX1 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.04■□□□□ -0
VPS33AQ96AX1 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
VPS33AQ96AX1 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VPS33AQ96AX1 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VPS33AQ96AX1 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
VPS33AQ96AX1 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.04■□□□□ -0
VPS33AQ96AX1 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
VPS33AQ96AX1 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VPS33AQ96AX1 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.04■□□□□ -0
VPS33AQ96AX1 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.04■□□□□ -0
VPS33AQ96AX1 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
VPS33AQ96AX1 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VPS33AQ96AX1 FAM220BP-201ENST00000377689 816 ntBASIC15.04■□□□□ -0
VPS33AQ96AX1 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VPS33AQ96AX1 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.04■□□□□ -0
VPS33AQ96AX1 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.04■□□□□ -0
VPS33AQ96AX1 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.04■□□□□ -0
VPS33AQ96AX1 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.04■□□□□ -0
VPS33AQ96AX1 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.04■□□□□ -0
VPS33AQ96AX1 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.04■□□□□ -0
VPS33AQ96AX1 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.04■□□□□ -0
VPS33AQ96AX1 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VPS33AQ96AX1 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VPS33AQ96AX1 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
VPS33AQ96AX1 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
VPS33AQ96AX1 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VPS33AQ96AX1 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VPS33AQ96AX1 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VPS33AQ96AX1 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VPS33AQ96AX1 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
VPS33AQ96AX1 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.04■□□□□ -0
VPS33AQ96AX1 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.04■□□□□ -0
VPS33AQ96AX1 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.04■□□□□ -0
VPS33AQ96AX1 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
VPS33AQ96AX1 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VPS33AQ96AX1 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VPS33AQ96AX1 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VPS33AQ96AX1 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
VPS33AQ96AX1 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.03■□□□□ -0
VPS33AQ96AX1 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VPS33AQ96AX1 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VPS33AQ96AX1 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VPS33AQ96AX1 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VPS33AQ96AX1 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
VPS33AQ96AX1 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.03■□□□□ -0
VPS33AQ96AX1 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.03■□□□□ -0
VPS33AQ96AX1 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VPS33AQ96AX1 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
VPS33AQ96AX1 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VPS33AQ96AX1 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
VPS33AQ96AX1 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
VPS33AQ96AX1 IL9RP2-201ENST00000423948 1312 ntBASIC15.03■□□□□ -0
VPS33AQ96AX1 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
VPS33AQ96AX1 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
VPS33AQ96AX1 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
VPS33AQ96AX1 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VPS33AQ96AX1 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VPS33AQ96AX1 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
VPS33AQ96AX1 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.03■□□□□ -0
VPS33AQ96AX1 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
VPS33AQ96AX1 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.03■□□□□ -0
VPS33AQ96AX1 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms