Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC13.9□□□□□ -0.18
RFT1Q96AA3 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RFT1Q96AA3 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC13.9□□□□□ -0.18
RFT1Q96AA3 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RFT1Q96AA3 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RFT1Q96AA3 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.9□□□□□ -0.18
RFT1Q96AA3 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RFT1Q96AA3 AC015656.1-201ENST00000624209 3578 ntBASIC13.9□□□□□ -0.18
RFT1Q96AA3 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RFT1Q96AA3 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
RFT1Q96AA3 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RFT1Q96AA3 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
RFT1Q96AA3 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RFT1Q96AA3 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.9□□□□□ -0.18
RFT1Q96AA3 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RFT1Q96AA3 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.9□□□□□ -0.18
RFT1Q96AA3 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.9□□□□□ -0.18
RFT1Q96AA3 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.9□□□□□ -0.19
RFT1Q96AA3 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
RFT1Q96AA3 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.9□□□□□ -0.19
RFT1Q96AA3 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
RFT1Q96AA3 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
RFT1Q96AA3 HLA-A-201ENST00000376802 1334 ntBASIC13.9□□□□□ -0.19
RFT1Q96AA3 PTENP1-202ENST00000532280 3996 ntBASIC13.9□□□□□ -0.19
RFT1Q96AA3 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RFT1Q96AA3 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RFT1Q96AA3 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RFT1Q96AA3 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFT1Q96AA3 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.89□□□□□ -0.19
RFT1Q96AA3 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFT1Q96AA3 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.89□□□□□ -0.19
RFT1Q96AA3 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.89□□□□□ -0.19
RFT1Q96AA3 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFT1Q96AA3 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
RFT1Q96AA3 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.89□□□□□ -0.19
RFT1Q96AA3 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFT1Q96AA3 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.89□□□□□ -0.19
RFT1Q96AA3 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RFT1Q96AA3 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
RFT1Q96AA3 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFT1Q96AA3 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.89□□□□□ -0.19
RFT1Q96AA3 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
RFT1Q96AA3 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
RFT1Q96AA3 AC140658.5-201ENST00000438532 169 ntBASIC13.89□□□□□ -0.19
RFT1Q96AA3 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
RFT1Q96AA3 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC13.89□□□□□ -0.19
RFT1Q96AA3 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC13.89□□□□□ -0.19
RFT1Q96AA3 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC13.89□□□□□ -0.19
RFT1Q96AA3 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC13.89□□□□□ -0.19
RFT1Q96AA3 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.89□□□□□ -0.19
RFT1Q96AA3 PENK-208ENST00000523051 772 ntTSL 5 BASIC13.89□□□□□ -0.19
RFT1Q96AA3 AL662844.1-201ENST00000546340 181 ntBASIC13.89□□□□□ -0.19
RFT1Q96AA3 CD63-204ENST00000546939 779 ntTSL 3 BASIC13.89□□□□□ -0.19
RFT1Q96AA3 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC13.89□□□□□ -0.19
RFT1Q96AA3 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
RFT1Q96AA3 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC13.89□□□□□ -0.19
RFT1Q96AA3 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC13.89□□□□□ -0.19
RFT1Q96AA3 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
RFT1Q96AA3 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC13.89□□□□□ -0.19
RFT1Q96AA3 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFT1Q96AA3 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.89□□□□□ -0.19
RFT1Q96AA3 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.89□□□□□ -0.19
RFT1Q96AA3 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFT1Q96AA3 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.89□□□□□ -0.19
RFT1Q96AA3 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
RFT1Q96AA3 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
RFT1Q96AA3 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.89□□□□□ -0.19
RFT1Q96AA3 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFT1Q96AA3 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RFT1Q96AA3 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFT1Q96AA3 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFT1Q96AA3 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.89□□□□□ -0.19
RFT1Q96AA3 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.89□□□□□ -0.19
RFT1Q96AA3 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.89□□□□□ -0.19
RFT1Q96AA3 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFT1Q96AA3 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFT1Q96AA3 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFT1Q96AA3 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.89□□□□□ -0.19
RFT1Q96AA3 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
RFT1Q96AA3 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RFT1Q96AA3 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
RFT1Q96AA3 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.88□□□□□ -0.19
RFT1Q96AA3 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RFT1Q96AA3 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.88□□□□□ -0.19
RFT1Q96AA3 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RFT1Q96AA3 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.88□□□□□ -0.19
RFT1Q96AA3 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
RFT1Q96AA3 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RFT1Q96AA3 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.88□□□□□ -0.19
RFT1Q96AA3 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.88□□□□□ -0.19
RFT1Q96AA3 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.88□□□□□ -0.19
RFT1Q96AA3 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RFT1Q96AA3 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RFT1Q96AA3 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
RFT1Q96AA3 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
RFT1Q96AA3 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.88□□□□□ -0.19
RFT1Q96AA3 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RFT1Q96AA3 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RFT1Q96AA3 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC13.88□□□□□ -0.19
RFT1Q96AA3 CRCP-205ENST00000431089 942 ntTSL 2 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms