Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
SLC44A1Q8WWI5 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC44A1Q8WWI5 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.65■□□□□ 0.1
SLC44A1Q8WWI5 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC44A1Q8WWI5 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC44A1Q8WWI5 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.64■□□□□ 0.1
SLC44A1Q8WWI5 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC44A1Q8WWI5 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SLC44A1Q8WWI5 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC44A1Q8WWI5 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC44A1Q8WWI5 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC44A1Q8WWI5 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC44A1Q8WWI5 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC44A1Q8WWI5 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC44A1Q8WWI5 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC44A1Q8WWI5 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
SLC44A1Q8WWI5 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SLC44A1Q8WWI5 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC44A1Q8WWI5 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
SLC44A1Q8WWI5 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC44A1Q8WWI5 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.64■□□□□ 0.09
SLC44A1Q8WWI5 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC44A1Q8WWI5 AL592309.1-201ENST00000443127 649 ntBASIC15.64■□□□□ 0.09
SLC44A1Q8WWI5 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.64■□□□□ 0.09
SLC44A1Q8WWI5 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.64■□□□□ 0.09
SLC44A1Q8WWI5 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC44A1Q8WWI5 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.64■□□□□ 0.09
SLC44A1Q8WWI5 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.64■□□□□ 0.09
SLC44A1Q8WWI5 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.64■□□□□ 0.09
SLC44A1Q8WWI5 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC44A1Q8WWI5 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC44A1Q8WWI5 AC105021.1-202ENST00000570572 669 ntBASIC15.64■□□□□ 0.09
SLC44A1Q8WWI5 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SLC44A1Q8WWI5 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.64■□□□□ 0.09
SLC44A1Q8WWI5 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC44A1Q8WWI5 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SLC44A1Q8WWI5 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC44A1Q8WWI5 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SLC44A1Q8WWI5 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC44A1Q8WWI5 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
SLC44A1Q8WWI5 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC44A1Q8WWI5 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.64■□□□□ 0.09
SLC44A1Q8WWI5 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC44A1Q8WWI5 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.64■□□□□ 0.09
SLC44A1Q8WWI5 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SLC44A1Q8WWI5 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC44A1Q8WWI5 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
SLC44A1Q8WWI5 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.63■□□□□ 0.09
SLC44A1Q8WWI5 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC44A1Q8WWI5 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SLC44A1Q8WWI5 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC44A1Q8WWI5 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC44A1Q8WWI5 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC44A1Q8WWI5 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
SLC44A1Q8WWI5 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.63■□□□□ 0.09
SLC44A1Q8WWI5 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC44A1Q8WWI5 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SLC44A1Q8WWI5 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC44A1Q8WWI5 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SLC44A1Q8WWI5 YBX2P1-201ENST00000394192 760 ntBASIC15.63■□□□□ 0.09
SLC44A1Q8WWI5 MIR940-201ENST00000401276 94 ntBASIC15.63■□□□□ 0.09
SLC44A1Q8WWI5 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.63■□□□□ 0.09
SLC44A1Q8WWI5 MCCD1P2-201ENST00000423228 335 ntBASIC15.63■□□□□ 0.09
SLC44A1Q8WWI5 AL353705.2-201ENST00000428243 662 ntBASIC15.63■□□□□ 0.09
SLC44A1Q8WWI5 TARDBPP1-201ENST00000442013 1203 ntBASIC15.63■□□□□ 0.09
SLC44A1Q8WWI5 ACTG1P14-201ENST00000446382 1122 ntBASIC15.63■□□□□ 0.09
SLC44A1Q8WWI5 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.63■□□□□ 0.09
SLC44A1Q8WWI5 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.63■□□□□ 0.09
SLC44A1Q8WWI5 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SLC44A1Q8WWI5 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SLC44A1Q8WWI5 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.63■□□□□ 0.09
SLC44A1Q8WWI5 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC44A1Q8WWI5 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.63■□□□□ 0.09
SLC44A1Q8WWI5 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.63■□□□□ 0.09
SLC44A1Q8WWI5 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
SLC44A1Q8WWI5 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.63■□□□□ 0.09
SLC44A1Q8WWI5 AC055717.3-201ENST00000622967 595 ntBASIC15.63■□□□□ 0.09
SLC44A1Q8WWI5 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SLC44A1Q8WWI5 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.63■□□□□ 0.09
SLC44A1Q8WWI5 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC44A1Q8WWI5 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SLC44A1Q8WWI5 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
SLC44A1Q8WWI5 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SLC44A1Q8WWI5 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.63■□□□□ 0.09
SLC44A1Q8WWI5 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC44A1Q8WWI5 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.63■□□□□ 0.09
SLC44A1Q8WWI5 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.63■□□□□ 0.09
SLC44A1Q8WWI5 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC44A1Q8WWI5 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.63■□□□□ 0.09
SLC44A1Q8WWI5 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC44A1Q8WWI5 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
SLC44A1Q8WWI5 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SLC44A1Q8WWI5 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
SLC44A1Q8WWI5 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SLC44A1Q8WWI5 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.62■□□□□ 0.09
SLC44A1Q8WWI5 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SLC44A1Q8WWI5 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
SLC44A1Q8WWI5 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SLC44A1Q8WWI5 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.62■□□□□ 0.09
SLC44A1Q8WWI5 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms