Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
PRUNE2Q8WUY3 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PRUNE2Q8WUY3 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.84■□□□□ 0.13
PRUNE2Q8WUY3 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC15.84■□□□□ 0.13
PRUNE2Q8WUY3 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PRUNE2Q8WUY3 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC15.84■□□□□ 0.13
PRUNE2Q8WUY3 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.84■□□□□ 0.13
PRUNE2Q8WUY3 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
PRUNE2Q8WUY3 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRUNE2Q8WUY3 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC15.84■□□□□ 0.13
PRUNE2Q8WUY3 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.84■□□□□ 0.13
PRUNE2Q8WUY3 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC15.84■□□□□ 0.13
PRUNE2Q8WUY3 AP000911.2-201ENST00000534330 502 ntBASIC15.84■□□□□ 0.13
PRUNE2Q8WUY3 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC15.84■□□□□ 0.13
PRUNE2Q8WUY3 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PRUNE2Q8WUY3 MBP-238ENST00000580402 915 ntTSL 5 BASIC15.84■□□□□ 0.13
PRUNE2Q8WUY3 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRUNE2Q8WUY3 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.84■□□□□ 0.13
PRUNE2Q8WUY3 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PRUNE2Q8WUY3 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.84■□□□□ 0.13
PRUNE2Q8WUY3 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PRUNE2Q8WUY3 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRUNE2Q8WUY3 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PRUNE2Q8WUY3 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
PRUNE2Q8WUY3 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
PRUNE2Q8WUY3 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRUNE2Q8WUY3 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PRUNE2Q8WUY3 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC15.84■□□□□ 0.13
PRUNE2Q8WUY3 AC084752.1-201ENST00000509766 622 ntBASIC15.84■□□□□ 0.13
PRUNE2Q8WUY3 AC011840.2-201ENST00000563063 1520 ntBASIC15.84■□□□□ 0.13
PRUNE2Q8WUY3 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PRUNE2Q8WUY3 LINC01144-201ENST00000626198 1710 ntBASIC15.84■□□□□ 0.13
PRUNE2Q8WUY3 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PRUNE2Q8WUY3 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.84■□□□□ 0.13
PRUNE2Q8WUY3 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.84■□□□□ 0.13
PRUNE2Q8WUY3 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRUNE2Q8WUY3 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
PRUNE2Q8WUY3 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PRUNE2Q8WUY3 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
PRUNE2Q8WUY3 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC15.83■□□□□ 0.13
PRUNE2Q8WUY3 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC15.83■□□□□ 0.13
PRUNE2Q8WUY3 AC026320.2-201ENST00000434379 478 ntBASIC15.83■□□□□ 0.13
PRUNE2Q8WUY3 VDAC1P1-201ENST00000439229 848 ntBASIC15.83■□□□□ 0.13
PRUNE2Q8WUY3 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC15.83■□□□□ 0.13
PRUNE2Q8WUY3 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
PRUNE2Q8WUY3 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
PRUNE2Q8WUY3 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
PRUNE2Q8WUY3 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
PRUNE2Q8WUY3 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC15.83■□□□□ 0.13
PRUNE2Q8WUY3 AMT-239ENST00000636865 1914 ntTSL 5 BASIC15.83■□□□□ 0.13
PRUNE2Q8WUY3 GATB-213ENST00000515812 1893 ntTSL 5 BASIC15.83■□□□□ 0.12
PRUNE2Q8WUY3 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRUNE2Q8WUY3 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
PRUNE2Q8WUY3 KRT17P5-201ENST00000332088 839 ntBASIC15.83■□□□□ 0.12
PRUNE2Q8WUY3 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PRUNE2Q8WUY3 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRUNE2Q8WUY3 AC055811.3-201ENST00000584952 686 ntBASIC15.83■□□□□ 0.12
PRUNE2Q8WUY3 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC15.83■□□□□ 0.12
PRUNE2Q8WUY3 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
PRUNE2Q8WUY3 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PRUNE2Q8WUY3 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRUNE2Q8WUY3 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PRUNE2Q8WUY3 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC15.83■□□□□ 0.12
PRUNE2Q8WUY3 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
PRUNE2Q8WUY3 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.83■□□□□ 0.12
PRUNE2Q8WUY3 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRUNE2Q8WUY3 AC080080.1-201ENST00000625121 2420 ntBASIC15.83■□□□□ 0.12
PRUNE2Q8WUY3 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
PRUNE2Q8WUY3 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PRUNE2Q8WUY3 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRUNE2Q8WUY3 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRUNE2Q8WUY3 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRUNE2Q8WUY3 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC15.83■□□□□ 0.12
PRUNE2Q8WUY3 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRUNE2Q8WUY3 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15.83■□□□□ 0.12
PRUNE2Q8WUY3 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
PRUNE2Q8WUY3 ELP5-212ENST00000574255 671 ntTSL 2 BASIC15.83■□□□□ 0.12
PRUNE2Q8WUY3 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC15.83■□□□□ 0.12
PRUNE2Q8WUY3 AL353622.2-201ENST00000605846 425 ntBASIC15.83■□□□□ 0.12
PRUNE2Q8WUY3 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PRUNE2Q8WUY3 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRUNE2Q8WUY3 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRUNE2Q8WUY3 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRUNE2Q8WUY3 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PRUNE2Q8WUY3 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.83■□□□□ 0.12
PRUNE2Q8WUY3 AC144522.1-201ENST00000625111 1658 ntBASIC15.83■□□□□ 0.12
PRUNE2Q8WUY3 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRUNE2Q8WUY3 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.83■□□□□ 0.12
PRUNE2Q8WUY3 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
PRUNE2Q8WUY3 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRUNE2Q8WUY3 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.82■□□□□ 0.12
PRUNE2Q8WUY3 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC15.82■□□□□ 0.12
PRUNE2Q8WUY3 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.82■□□□□ 0.12
PRUNE2Q8WUY3 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRUNE2Q8WUY3 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRUNE2Q8WUY3 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.82■□□□□ 0.12
PRUNE2Q8WUY3 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.82■□□□□ 0.12
PRUNE2Q8WUY3 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRUNE2Q8WUY3 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
PRUNE2Q8WUY3 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 764.2 ms