Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.31■□□□□ 0.2
TRAF3IP1Q8TDR0 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAF3IP1Q8TDR0 TSEN15P1-201ENST00000423257 515 ntBASIC16.31■□□□□ 0.2
TRAF3IP1Q8TDR0 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.31■□□□□ 0.2
TRAF3IP1Q8TDR0 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAF3IP1Q8TDR0 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.31■□□□□ 0.2
TRAF3IP1Q8TDR0 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAF3IP1Q8TDR0 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAF3IP1Q8TDR0 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAF3IP1Q8TDR0 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.31■□□□□ 0.2
TRAF3IP1Q8TDR0 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.31■□□□□ 0.2
TRAF3IP1Q8TDR0 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.31■□□□□ 0.2
TRAF3IP1Q8TDR0 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAF3IP1Q8TDR0 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAF3IP1Q8TDR0 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAF3IP1Q8TDR0 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAF3IP1Q8TDR0 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAF3IP1Q8TDR0 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAF3IP1Q8TDR0 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAF3IP1Q8TDR0 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAF3IP1Q8TDR0 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAF3IP1Q8TDR0 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAF3IP1Q8TDR0 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAF3IP1Q8TDR0 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAF3IP1Q8TDR0 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAF3IP1Q8TDR0 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.3■□□□□ 0.2
TRAF3IP1Q8TDR0 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.3■□□□□ 0.2
TRAF3IP1Q8TDR0 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TRAF3IP1Q8TDR0 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAF3IP1Q8TDR0 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC16.3■□□□□ 0.2
TRAF3IP1Q8TDR0 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAF3IP1Q8TDR0 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.3■□□□□ 0.2
TRAF3IP1Q8TDR0 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TRAF3IP1Q8TDR0 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAF3IP1Q8TDR0 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.3■□□□□ 0.2
TRAF3IP1Q8TDR0 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAF3IP1Q8TDR0 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TRAF3IP1Q8TDR0 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAF3IP1Q8TDR0 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAF3IP1Q8TDR0 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAF3IP1Q8TDR0 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAF3IP1Q8TDR0 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAF3IP1Q8TDR0 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAF3IP1Q8TDR0 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAF3IP1Q8TDR0 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAF3IP1Q8TDR0 HIST3H2BA-201ENST00000436555 524 ntBASIC16.3■□□□□ 0.2
TRAF3IP1Q8TDR0 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.3■□□□□ 0.2
TRAF3IP1Q8TDR0 CNN2P2-201ENST00000443536 909 ntBASIC16.3■□□□□ 0.2
TRAF3IP1Q8TDR0 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.3■□□□□ 0.2
TRAF3IP1Q8TDR0 CNN2P3-201ENST00000450201 906 ntBASIC16.3■□□□□ 0.2
TRAF3IP1Q8TDR0 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAF3IP1Q8TDR0 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TRAF3IP1Q8TDR0 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.3■□□□□ 0.2
TRAF3IP1Q8TDR0 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.3■□□□□ 0.2
TRAF3IP1Q8TDR0 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.3■□□□□ 0.2
TRAF3IP1Q8TDR0 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.3■□□□□ 0.2
TRAF3IP1Q8TDR0 AL136317.3-201ENST00000618497 906 ntBASIC16.3■□□□□ 0.2
TRAF3IP1Q8TDR0 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.3■□□□□ 0.2
TRAF3IP1Q8TDR0 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAF3IP1Q8TDR0 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAF3IP1Q8TDR0 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAF3IP1Q8TDR0 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAF3IP1Q8TDR0 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAF3IP1Q8TDR0 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAF3IP1Q8TDR0 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAF3IP1Q8TDR0 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.3■□□□□ 0.2
TRAF3IP1Q8TDR0 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAF3IP1Q8TDR0 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.3■□□□□ 0.2
TRAF3IP1Q8TDR0 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.29■□□□□ 0.2
TRAF3IP1Q8TDR0 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRAF3IP1Q8TDR0 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.29■□□□□ 0.2
TRAF3IP1Q8TDR0 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAF3IP1Q8TDR0 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TRAF3IP1Q8TDR0 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.29■□□□□ 0.2
TRAF3IP1Q8TDR0 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAF3IP1Q8TDR0 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.29■□□□□ 0.2
TRAF3IP1Q8TDR0 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRAF3IP1Q8TDR0 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRAF3IP1Q8TDR0 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAF3IP1Q8TDR0 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAF3IP1Q8TDR0 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.29■□□□□ 0.2
TRAF3IP1Q8TDR0 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
TRAF3IP1Q8TDR0 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
TRAF3IP1Q8TDR0 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TRAF3IP1Q8TDR0 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
TRAF3IP1Q8TDR0 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.29■□□□□ 0.2
TRAF3IP1Q8TDR0 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.29■□□□□ 0.2
TRAF3IP1Q8TDR0 HLA-J-203ENST00000494367 1087 ntBASIC16.29■□□□□ 0.2
TRAF3IP1Q8TDR0 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.29■□□□□ 0.2
TRAF3IP1Q8TDR0 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.29■□□□□ 0.2
TRAF3IP1Q8TDR0 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.29■□□□□ 0.2
TRAF3IP1Q8TDR0 AC004449.1-201ENST00000564240 433 ntBASIC16.29■□□□□ 0.2
TRAF3IP1Q8TDR0 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAF3IP1Q8TDR0 AL691403.2-201ENST00000618460 490 ntBASIC16.29■□□□□ 0.2
TRAF3IP1Q8TDR0 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAF3IP1Q8TDR0 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRAF3IP1Q8TDR0 AC006058.4-201ENST00000624016 1670 ntBASIC16.29■□□□□ 0.2
TRAF3IP1Q8TDR0 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
TRAF3IP1Q8TDR0 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRAF3IP1Q8TDR0 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms